CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH41723
KRH60424

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G05840.1	KRH41723	AT1G68050.1	14749489
AT3G05840.1	KRH60424	AT1G68050.1	14749489

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH33767	Soybean	cytosol	94.37	98.05
KRH68409	Soybean	cytosol	91.55	96.06
KRG96686	Soybean	cytosol	91.31	95.81
VIT_14s0060g00600.t01	Wine grape	cytosol	85.68	95.8
PGSC0003DMT400007088	Potato	cytosol	89.2	92.91
Solyc01g101000.2.1	Tomato	cytosol	88.97	92.67
AT5G26751.1	Thale cress	cytosol	87.79	92.35
CDX88238	Canola	cytosol	86.39	91.32
Bra009916.1-P	Field mustard	cytosol	86.39	91.32
CDX80585	Canola	cytosol	86.15	91.29
CDX87033	Canola	cytosol	86.15	90.39
Bra036593.1-P	Field mustard	cytosol	86.15	90.39
CDY19757	Canola	cytosol	86.15	90.39
AT3G05840.1	Thale cress	cytosol	86.62	90.22
Bra001169.1-P	Field mustard	cytosol	86.15	89.51
CDY49981	Canola	cytosol	85.92	89.05
CDX74129	Canola	cytosol	85.92	89.05
Bra039407.1-P	Field mustard	cytosol	85.45	88.78
CDY05202	Canola	cytosol	85.45	88.78
KRH31752	Soybean	cytosol	84.04	87.53
HORVU5Hr1G117030.1	Barley	cytosol	82.63	86.27
TraesCS4A01G361100.1	Wheat	cytosol	82.39	86.03
TraesCS5B01G511800.1	Wheat	cytosol	82.39	85.82
TraesCS5D01G512300.2	Wheat	cytosol	82.39	85.19
CDY18828	Canola	cytosol	78.17	82.43
Bra040251.1-P	Field mustard	cytosol	74.65	82.38
KRH69166	Soybean	cytosol	84.74	80.04
KRH21245	Soybean	cytosol	65.96	75.13
KRH26299	Soybean	cytosol	73.71	74.76
KRH61707	Soybean	cytosol	66.67	74.74
KRH52380	Soybean	cytosol	66.67	74.74
KRH06055	Soybean	cytosol	73.24	74.29
KRH11042	Soybean	cytosol	66.2	74.21
KRH25797	Soybean	cytosol	70.89	71.9
KRH55721	Soybean	cytosol	70.66	71.84
CDY27737	Canola	cytosol	86.15	71.4
KRH27067	Soybean	cytosol	67.84	70.66
KRH22265	Soybean	cytosol	68.54	70.02
KRH48234	Soybean	cytosol, mitochondrion	74.88	67.87
KRH42881	Soybean	cytosol	60.8	67.62
KRH58985	Soybean	cytosol	60.56	67.36
KRH65140	Soybean	mitochondrion	73.24	66.38
KRH40543	Soybean	mitochondrion	71.36	66.09
KRH00638	Soybean	mitochondrion	71.36	65.1
KRH75231	Soybean	cytosol	14.79	63.0
KRH62838	Soybean	cytosol, mitochondrion	11.5	59.76
KRH21176	Soybean	cytosol	34.74	56.92
KRH70115	Soybean	cytosol	42.25	51.87
KRH12527	Soybean	cytosol, endoplasmic reticulum, plasma membrane	20.19	37.89
KRH32741	Soybean	mitochondrion	19.72	37.0
KRH58078	Soybean	cytosol	1.41	31.58
KRH28388	Soybean	cytosol	24.41	31.23
KRH77093	Soybean	nucleus	24.41	31.23
KRH04448	Soybean	nucleus	24.88	30.55
KRH04471	Soybean	nucleus	25.59	27.39
KRH58068	Soybean	mitochondrion	25.35	26.28
KRH58076	Soybean	endoplasmic reticulum	24.18	26.28

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100798867	MapMan:11.3.2.3	MapMan:18.4.3.4	Gene3D:3.30.200.20	EMBL:ACUP02012622
EnsemblPlantsGene:GLYMA_20G093600	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	UniProt:I1NEV7	InterPro:IPR000719
EnsemblPlants:KRG90477	ProteinID:KRG90477	ProteinID:KRG90477.1	ProteinID:KRG90478.1	ProteinID:KRG90479.1	ProteinID:KRG90480.1
ProteinID:KRG90481.1	InterPro:Kinase-like_dom_sf	PFAM:PF00069	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011
PANTHER:PTHR24057	PANTHER:PTHR24057:SF35	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112
InterPro:Ser/Thr_kinase_AS	UniParc:UPI000152A968	:	:	:	:

Description

hypothetical protein

Coordinates

chr20:+:33686174..33690857

Molecular Weight (calculated)

48405.8 Da

IEP (calculated)

8.651

GRAVY (calculated)

-0.296

Length

426 amino acids

Sequence
(BLAST)

001: MVFEQQQLKE KRDSAKMTSV GVAPTSGLRE ASGHGAAAAD RLPEEMNDMK IRDDREMEAT VVDGNGTETG HIIVTTIGGR NGQPKQTISY MAERVVGHGS
101: FGVVFQAKCL ETGETVAIKK VLQDKRYKNR ELQTMRLLDH PNVVALKHCF FSTTEKDELY LNLVLEYVPE TVNRVIKHYN KLNQRMPLIY VKLYTYQIFR
201: ALSYIHRCIG VCHRDIKPQN LLVNPHTHQV KLCDFGSAKV LVKGEPNISY ICSRYYRAPE LIFGATEYTS AIDIWSVGCV LAELLLGQPL FPGESGVDQL
301: VEIIKVLGTP TREEIKCMNP NYTEFKFPQI KAHPWHKIFH KRMPPEAVDL VSRLLQYSPN LRCTAFDALT HPFFDELRDP NTRLPNGRFL PPLFNFKSHE
401: LKGVPSEILV KLVPEHARKQ CPFLGS

Best Arabidopsis Sequence Match ( AT5G14640.1 )
(BLAST)

001: MASVGTLPAS SMATKQSNAS ICAEKLPEGI NEMKIKDDKE MEAAVVDGNG TETGHIIVTT IGGKNGQPKQ TISYMAERIV GQGSFGIVFQ AKCLETGETV
101: AIKKVLQDKR YKNRELQTMR LLDHPNVVSL KHCFFSTTEK DELYLNLVLE YVPETVYRVS KHYSRANQRM PIIYVKLYTY QICRALAYIH GGVGVCHRDI
201: KPQNLLVNPH THQVKLCDFG SAKVLVKGEP NISYICSRYY RAPELIFGAT EYTTTIDIWS AGCVLAELLL GQPLFPGESG VDQLVEIIKV LGTPTREEIK
301: CMNPNYTEFK FPQIKAHPWH KIFHKRTPPE AVDLVSRLLQ YSPNLRSTAM EAIVHPFFDE LRDPNTRLPN GRALPPLFNF KPQELKGASL ELLSKLIPDH
401: ARKQCSFLAL

Arabidopsis Description

ASK5Shaggy-related protein kinase epsilon [Source:UniProtKB/Swiss-Prot;Acc:Q8VZD5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.