CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG90477
KRG91704
KRG96686
KRH01188
KRH03487
KRH03510
KRH08640
KRH33767
KRH35085
KRH40083
KRH54567
KRH54582
KRH56889
KRH56903
KRH63298
KRH63324
KRH68409

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G68050.1	KRG91704	AT1G22770.1	17704763
AT1G68050.1	KRH08640	AT1G22770.1	17704763
AT1G68050.1	KRH35085	AT1G22770.1	17704763
AT1G68050.1	KRG91704	AT1G22770.1	17872410
AT1G68050.1	KRH08640	AT1G22770.1	17872410
AT1G68050.1	KRH35085	AT1G22770.1	17872410
AT1G68050.1	KRG90477	AT3G05840.1	14749489
AT1G68050.1	KRG96686	AT3G05840.1	14749489
AT1G68050.1	KRH33767	AT3G05840.1	14749489
AT1G68050.1	KRH68409	AT3G05840.1	14749489
AT1G68050.1	KRH03487	AT3G47500.1	16002617
AT1G68050.1	KRH54567	AT3G47500.1	16002617
AT1G68050.1	KRH56903	AT3G47500.1	16002617
AT1G68050.1	KRH63324	AT3G47500.1	16002617
AT1G68050.1	KRH01188	AT5G39660.1	16002617
AT1G68050.1	KRH40083	AT5G39660.1	16002617
AT1G68050.1	KRH03510	AT5G61380.1	14654842
AT1G68050.1	KRH54582	AT5G61380.1	14654842
AT1G68050.1	KRH56889	AT5G61380.1	14654842
AT1G68050.1	KRH63298	AT5G61380.1	14654842
AT1G68050.1	KRH03487	AT5G62430.1	16002617
AT1G68050.1	KRH54567	AT5G62430.1	16002617
AT1G68050.1	KRH56903	AT5G62430.1	16002617
AT1G68050.1	KRH63324	AT5G62430.1	16002617

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41723	Soybean	cytosol, extracellular, nucleus	92.74	88.87
VIT_01s0011g05810.t01	Wine grape	cytosol	85.97	86.53
AT1G68050.1	Thale cress	cytosol	81.61	81.74
PGSC0003DMT400051416	Potato	cytosol	82.1	80.28
Solyc01g005300.2.1	Tomato	cytosol	75.81	77.43
GSMUA_Achr7P11200_001	Banana	cytosol	68.06	73.78
OQU83614	Sorghum	cytosol	70.65	73.74
Zm00001d007445_P001	Maize	cytosol	71.45	72.74
Zm00001d053091_P001	Maize	cytosol	71.77	72.01
Os11t0547000-01	Rice	cytosol	72.74	71.59
TraesCS4B01G157500.1	Wheat	cytosol	68.71	68.71
TraesCS4A01G164000.1	Wheat	cytosol	68.55	67.89
KRH12251	Soybean	cytosol	63.87	64.81
KRH19039	Soybean	cytosol	64.35	64.67
KRH02848	Soybean	cytosol	64.35	64.67
KRH37279	Soybean	cytosol	63.71	64.33
KRH47295	Soybean	endoplasmic reticulum, plasma membrane, plastid	16.29	22.1
KRH44610	Soybean	endoplasmic reticulum, nucleus, peroxisome	14.52	20.45

Protein Annotations

MapMan:19.2.2.8.1.4.4	Gene3D:2.120.10.80	MapMan:26.1.2.3.1	Gene3D:3.30.450.20	EMBL:ACUP02003364	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	EnsemblPlantsGene:GLYMA_05G239400	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1K5J7
InterPro:IPR000014	InterPro:IPR001810	InterPro:IPR015915	EnsemblPlants:KRH60424	ProteinID:KRH60424	ProteinID:KRH60424.1
InterPro:Kelch-typ_b-propeller	InterPro:Kelch_2	InterPro:PAC	InterPro:PAS	InterPro:PAS-like_dom_sf	PFAM:PF00646
PFAM:PF07646	PFAM:PF13415	PFAM:PF13418	PFAM:PF13426	PANTHER:PTHR23244	PANTHER:PTHR23244:SF263
SMART:SM00086	SUPFAM:SSF117281	SUPFAM:SSF55785	SUPFAM:SSF81383	TIGRFAMs:TIGR00229	UniParc:UPI00023C4F7D
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:41510779..41514170

Molecular Weight (calculated)

69136.6 Da

IEP (calculated)

6.455

GRAVY (calculated)

-0.308

Length

620 amino acids

Sequence
(BLAST)

001: MAVTKEKEDV RNTGKRLKCM RNEEEEVYEE EESELPLKPG FFFYPTTPTS FVVSDALEPD FPIIYVNKVF EISTGYRADE ALGRNCRFLQ YRDPRAQRRH
101: PLVDPVVVSE IRRCLEEGVE FQGELLNFRK DGTPLVNRLR LAPIHDDDGT VTHVIGIQLF SEANIDLNRV SYPVFKETCN QDFDKTGKYN PKSGQSLYSQ
201: HQEMCGILQL SDEVLAHNIL SRLTPRDVAS IGSVCRRIRQ LTKNEHVRKM VCQNAWGKEV TGTLELMTKK LGWGRLTREL TTLEAVCWRK LTVGGAVEPS
301: RCNFSACAAG NRLVLFGGEG VDMQPMDDTF VLNLDAKNPE WRRVSVKSSP PGRWGHTLSC LNGSWLVVFG GCGRQGLLND VFVLDLDAQQ PTWREVCGGT
401: PPLPRSWHSS CTIEGSKLVV SGGCTDAGVL LSDTYLLDLT TDNPTWREIP TSWAPPSRLG HSLSVYGRTK ILMFGGLAKS GHLRLRSGEA YTIDLEDEQP
501: QWRQLEYSAF TGLASQSAVV PPPRLDHVAV SMPCGRIIIF GGSIAGLHSP SQLFLLDPSE EKPSWRILNV PGQPPKFAWG HSTCVVGGTR VLVLGGHTGE
601: EWILNELHEL CLASRQDSDL

Best Arabidopsis Sequence Match ( AT1G68050.1 )
(BLAST)

001: MAREHAIGEA TGKRKKRGRV EEAEEYCNDG IEEQVEDEKL PLEVGMFYYP MTPPSFIVSD ALEPDFPLIY VNRVFEVFTG YRADEVLGRN CRFLQYRDPR
101: AQRRHPLVDP VVVSEIRRCL EEGIEFQGEL LNFRKDGTPL VNRLRLAPIR DDDGTITHVI GIQVFSETTI DLDRVSYPVF KHKQQLDQTS ECLFPSGSPR
201: FKEHHEDFCG ILQLSDEVLA HNILSRLTPR DVASIGSACR RLRQLTKNES VRKMVCQNAW GKEITGTLEI MTKKLRWGRL ARELTTLEAV CWRKFTVGGI
301: VQPSRCNFSA CAVGNRLVLF GGEGVNMQPL DDTFVLNLDA ECPEWQRVRV TSSPPGRWGH TLSCLNGSWL VVFGGCGRQG LLNDVFVLDL DAKHPTWKEV
401: AGGTPPLPRS WHSSCTIEGS KLVVSGGCTD AGVLLSDTFL LDLTTDKPTW KEIPTSWAPP SRLGHSLSVF GRTKILMFGG LANSGHLKLR SGEAYTIDLE
501: DEEPRWRELE CSAFPGVVVP PPRLDHVAVS MPCGRVIIFG GSIAGLHSPS QLFLIDPAEE KPSWRILNVP GKPPKLAWGH STCVVGGTRV LVLGGHTGEE
601: WILNELHELC LASRQDSDL

Arabidopsis Description

ADO3FKF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.