CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH12251	Soybean	cytosol	96.42	96.89
KRH19039	Soybean	cytosol	90.07	89.63
KRH02848	Soybean	cytosol	89.74	89.3
VIT_11s0052g00730.t01	Wine grape	cytosol	78.66	87.18
Solyc07g017750.2.1	Tomato	mitochondrion	74.43	82.94
AT5G57360.2	Thale cress	nucleus	82.41	80.83
CDY39128	Canola	nucleus	73.45	74.67
Bra038831.1-P	Field mustard	nucleus	74.1	73.86
CDX82603	Canola	nucleus	73.78	73.66
CDY49135	Canola	nucleus	71.82	73.01
CDY39127	Canola	nucleus	72.31	71.96
Bra038830.1-P	Field mustard	nucleus	71.99	71.64
CDY39129	Canola	cytosol	70.68	71.5
Bra038832.1-P	Field mustard	cytosol	70.52	71.22
CDX82604	Canola	cytosol	70.36	71.17
KRH60424	Soybean	cytosol	64.33	63.71
KRH41723	Soybean	cytosol, extracellular, nucleus	63.52	60.28
KRH47295	Soybean	endoplasmic reticulum, plasma membrane, plastid	16.78	22.54
KRH44610	Soybean	endoplasmic reticulum, nucleus, peroxisome	15.15	21.14

Protein Annotations

Gene3D:1.20.1280.50	EntrezGene:100805523	MapMan:19.2.2.8.1.4.4	Gene3D:2.120.10.80	MapMan:26.1.2.3.1	Gene3D:3.30.450.20
EMBL:ACUP02005436	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	EnsemblPlantsGene:GLYMA_09G056100	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	UniProt:I1L1A1	InterPro:IPR000014	InterPro:IPR001810	InterPro:IPR015915	EnsemblPlants:KRH37279
ProteinID:KRH37279	ProteinID:KRH37279.1	ProteinID:KRH37280.1	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_2	InterPro:PAS
InterPro:PAS-like_dom_sf	PFAM:PF07646	PFAM:PF12937	PFAM:PF13418	PFAM:PF13426	PFscan:PS50112
PANTHER:PTHR23244	PANTHER:PTHR23244:SF421	SUPFAM:SSF117281	SUPFAM:SSF55785	SUPFAM:SSF81383	TIGRFAMs:TIGR00229
UniParc:UPI0002338FF3	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:-:5010969..5022397

Molecular Weight (calculated)

66752.8 Da

IEP (calculated)

5.374

GRAVY (calculated)

-0.084

Length

614 amino acids

Sequence
(BLAST)

001: MEWDSNSDLS DDEAVSFMLN DDDDDAVGPL PFPVLQTAPC GFVVTDAVEP DHPIIYVNAV FEMVTGYRAE EVLGRNCRFL QCRGPFAKRR HPLVDSTVVS
101: EIRRCLDEGV EFQGELLNFR KDGSPLMNRL RLTPIYGEDE ITHVIGIQFF TEANIDLGPL PGSTIKESTK SSDRFHSVLS SLNPVPVGDR NVTRGICGIF
201: QLSDEVLSLK ILARLTPRDI ASVGSVCRHL YELTKNEDLW RMVCQNAWGS ETTRVLETVP GARRLGWGRL ARELTTLEAA AWRKLTVGGA VEPSRCNFSA
301: CAVGNRVVLF GGEGVNMQPM NDTFVLDLNS SNPEWQHVQV SSPPPGRWGH TLSCVNGSRL VVFGGCGTQG LLNDVFVLDL DAKPPTWREI SGLAPPLPRS
401: WHSSCTLDGT KLIVSGGCAD SGVLLSDTFL LDLSMEKPVW REIPVAWTPP SRLGHTLSVY GGRKILMFGG LAKSGALRFR SSDVFTMDLS EEEPCWRCVT
501: GSGLPGLPGT GNPGGIAPPP RLDHVAVSLP GGRILIFGGS VAGLHSASQL YILDPTDEKP TWRILNVPGR PPRFAWGHST CVVGGTRAIV MGGQTGEEWM
601: LSELHELSLA SSVS

Best Arabidopsis Sequence Match ( AT5G57360.1 )
(BLAST)

001: MEWDSGSDLS ADDASSLADD EEGGLFPGGG PIPYPVGNLL HTAPCGFVVT DAVEPDQPII YVNTVFEMVT GYRAEEVLGG NCRFLQCRGP FAKRRHPLVD
101: SMVVSEIRKC IDEGIEFQGE LLNFRKDGSP LMNRLRLTPI YGDDDTITHI IGIQFFIETD IDLGPVLGSS TKEKSIDGIY SALAAGERNV SRGMCGLFQL
201: SDEVVSMKIL SRLTPRDVAS VSSVCRRLYV LTKNEDLWRR VCQNAWGSET TRVLETVPGA KRLGWGRLAR ELTTLEAAAW RKLSVGGSVE PSRCNFSACA
301: VGNRVVLFGG EGVNMQPMND TFVLDLNSDY PEWQHVKVSS PPPGRWGHTL TCVNGSNLVV FGGCGQQGLL NDVFVLNLDA KPPTWREISG LAPPLPRSWH
401: SSCTLDGTKL IVSGGCADSG VLLSDTFLLD LSIEKPVWRE IPAAWTPPSR LGHTLSVYGG RKILMFGGLA KSGPLKFRSS DVFTMDLSEE EPCWRCVTGS
501: GMPGAGNPGG VAPPPRLDHV AVNLPGGRIL IFGGSVAGLH SASQLYLLDP TEDKPTWRIL NIPGRPPRFA WGHGTCVVGG TRAIVLGGQT GEEWMLSELH
601: ELSLASYLT

Arabidopsis Description

ZTLGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KAN2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.