CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038832.1-P	Field mustard	cytosol	99.67	99.51
CDX82604	Canola	cytosol	98.35	98.35
AT2G18915.2	Thale cress	nucleus	84.02	83.47
CDY39128	Canola	nucleus	82.54	82.95
CDX82603	Canola	nucleus	83.86	82.76
CDY39127	Canola	nucleus	83.03	81.69
CDY49135	Canola	nucleus	81.22	81.62
KRH12251	Soybean	cytosol	71.17	70.7
KRH37279	Soybean	cytosol	71.5	70.68
KRH02848	Soybean	cytosol	71.5	70.34
KRH19039	Soybean	cytosol	71.0	69.85
VIT_11s0052g00720.t01	Wine grape	cytosol	8.24	39.37
Solyc07g017740.2.1	Tomato	cytosol	8.07	31.61
CDY32406	Canola	cytosol, endoplasmic reticulum, plastid	16.31	21.43
CDX82216	Canola	cytosol, endoplasmic reticulum, plastid	16.14	21.17

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.4	Gene3D:2.120.10.80	MapMan:26.1.2.3.1	Gene3D:3.30.450.20	UniProt:A0A078HP11
EnsemblPlants:CDY39129	ProteinID:CDY39129	ProteinID:CDY39129.1	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00067299001	InterPro:IPR000014	InterPro:IPR001810	InterPro:IPR015915
InterPro:Kelch-typ_b-propeller	InterPro:PAS	InterPro:PAS-like_dom_sf	PFAM:PF12937	PFAM:PF13415	PFAM:PF13418
PFAM:PF13426	PFscan:PS50112	PFscan:PS50181	PANTHER:PTHR23244	PANTHER:PTHR23244:SF348	SUPFAM:SSF117281
SUPFAM:SSF55785	SUPFAM:SSF81383	TIGRFAMs:TIGR00229	UniParc:UPI0004EEBEF9	:	:

Description

BnaA07g01250DBnaA07g01250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HP11]

Coordinates

chrLK032441:-:30311..32864

Molecular Weight (calculated)

66956.2 Da

IEP (calculated)

7.781

GRAVY (calculated)

-0.181

Length

607 amino acids

Sequence
(BLAST)

001: MSCMKNQMEW DSDFDLSGRD NGPIPFPLSS LSKTATFGFV VTDALDPDHP IIYVNTVFEI ITGYRADEVI GKNCRFLQCR GPYAKRRHPS VDSTVVSKMR
101: RCLEKGIEFQ GELLNFRKDG SPLMNKLRLV PIREDDEITH IIGVLFFTDA KLAPSPAKEI TRKRDRSFTS ASPVGERNVS RGLCGIFELS DEVMAYRILS
201: RLTPRDIASV GCVCRRFNEL TKNDDVWRMV CQNTWGSEAT RVLETVPGAK RIGWVRLARE FTTHEATAWR KFSVGGVVQP SRCNFSTCAV GNKIVIFGGE
301: GVNMQPMNDT FVLDLGSTTP EWKSVLVSSP PPGRWGHTLS CVNGSRLVVF GGYGSHGLLN DVFLLDLDAD PPTWREVSGL APPIPRSWHS SCTLDGTKLI
401: VSGGCADSGA LLNDTFLLDL SMDIPTWREI RVPWSPPSRL GHTLTVYGDR KILMFGGLAE YGSRRFRSND AYTMNLSENE PCWRPLVGYG TSLPGGVAAP
501: RLDHVAISLP GGQILIFGGS VAGIDSASQL YLLDPTEEKP AWRVLNVKGS SPQFAWGHTT CVVGGTRLVV FGGQTGEEWM LNEAHELLLA NSSTKITSSR
601: HGEKRLF

Best Arabidopsis Sequence Match ( AT2G18915.1 )
(BLAST)

001: MQNQMEWDSD SDLSGGDEVA EDGWFGGDNG AIPFPVGSLP GTAPCGFVVS DALEPDNPII YVNTVFEIVT GYRAEEVIGP FTKRRHPMVD STIVAKMRQC
101: LENGIEFQGE LLNFRKDGSP LMNKLRLVPI REEDEITHFI GVLLFTDAKI DLGPSPDLSA KEIPRISRSF TSALPIGERN VSRGLCGIFE LSDEVIAIKI
201: LSQLTPGDIA SVGCVCRRLN ELTKNDDVWR MVCQNTWGTE ATRVLESVPG AKRIGWVRLA REFTTHEATA WRKFSVGGTV EPSRCNFSAC AVGNRIVIFG
301: GEGVNMQPMN DTFVLDLGSS SPEWKSVLVS SPPPGRWGHT LSCVNGSRLV VFGGYGSHGL LNDVFLLDLD ADPPSWREVS GLAPPIPRSW HSSCTLDGTK
401: LIVSGGCADS GALLSDTFLL DLSMDIPAWR EIPVPWTPPS RLGHTLTVYG DRKILMFGGL AKNGTLRFRS NDVYTMDLSE DEPSWRPVIG YGSSLPGGMA
501: APPPRLDHVA ISLPGGRILI FGGSVAGLDS ASQLYLLDPN EEKPAWRILN VQGGPPRFAW GHTTCVVGGT RLVVLGGQTG EEWMLNEAHE LLLATSTTAS
601: T

Arabidopsis Description

ADO2Adagio protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8W420]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.