Factsheet for AT2G18915.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82604	Canola	cytosol	83.63	84.18
CDY39129	Canola	cytosol	83.47	84.02
Bra038832.1-P	Field mustard	cytosol	83.47	83.88
AT5G57360.2	Thale cress	nucleus	72.67	70.93
AT1G68050.1	Thale cress	cytosol	58.92	58.16
VIT_11s0052g00720.t01	Wine grape	cytosol	9.0	43.31
Solyc07g017740.2.1	Tomato	cytosol	9.66	38.06
AT1G51550.1	Thale cress	plastid	16.69	21.34

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.4	Gene3D:2.120.10.80	MapMan:26.1.2.3.1	Gene3D:3.30.450.20	EntrezGene:816408
ProteinID:AAM14891.1	EMBL:AB038797	ProteinID:AEC06825.1	ProteinID:AEC06826.1	EMBL:AF252295	ArrayExpress:AT2G18915
EnsemblPlantsGene:AT2G18915	RefSeq:AT2G18915	TAIR:AT2G18915	RefSeq:AT2G18915-TAIR-G	EnsemblPlants:AT2G18915.2	TAIR:AT2G18915.2
EMBL:AY099709	Unigene:At.19440	EMBL:BT046116	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0000003
GO:GO:0003674	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005654	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464
GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009791
GO:GO:0009881	GO:GO:0009908	GO:GO:0009987	GO:GO:0015030	GO:GO:0016567	GO:GO:0018298
GO:GO:0019538	GO:GO:0038023	GO:GO:0042752	GO:GO:0048511	GO:GO:0050896	InterPro:IPR000014
InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_2	Symbol:LKP2	RefSeq:NP_565444.2
RefSeq:NP_849983.1	InterPro:PAS	InterPro:PAS-like_dom_sf	PFAM:PF07646	PFAM:PF12937	PFAM:PF13415
PFAM:PF13418	PFAM:PF13426	PO:PO:0000013	PO:PO:0000014	PO:PO:0000230	PO:PO:0000293
PO:PO:0001078	PO:PO:0004507	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0009001
PO:PO:0009005	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020100	PO:PO:0025022
PFscan:PS50112	PANTHER:PTHR23244	PANTHER:PTHR23244:SF348	UniProt:Q8W420	SUPFAM:SSF117281	SUPFAM:SSF55785
SUPFAM:SSF81383	TIGRFAMs:TIGR00229	UniParc:UPI00000A717D	SEG:seg	:	:

Description

ADO2Adagio protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8W420]

Coordinates

chr2:-:8194512..8197483

Molecular Weight (calculated)

66354.3 Da

IEP (calculated)

4.953

GRAVY (calculated)

-0.091

Length

611 amino acids

Sequence
(BLAST)

001: MQNQMEWDSD SDLSGGDEVA EDGWFGGDNG AIPFPVGSLP GTAPCGFVVS DALEPDNPII YVNTVFEIVT GYRAEEVIGR NCRFLQCRGP FTKRRHPMVD
101: STIVAKMRQC LENGIEFQGE LLNFRKDGSP LMNKLRLVPI REEDEITHFI GVLLFTDAKI DLGPSPDLSA KEIPRISRSF TSALPIGERN VSRGLCGIFE
201: LSDEVIAIKI LSQLTPGDIA SVGCVCRRLN ELTKNDDVWR MVCQNTWGTE ATRVLESVPG AKRIGWVRLA REFTTHEATA WRKFSVGGTV EPSRCNFSAC
301: AVGNRIVIFG GEGVNMQPMN DTFVLDLGSS SPEWKSVLVS SPPPGRWGHT LSCVNGSRLV VFGGYGSHGL LNDVFLLDLD ADPPSWREVS GLAPPIPRSW
401: HSSCTLDGTK LIVSGGCADS GALLSDTFLL DLSMDIPAWR EIPVPWTPPS RLGHTLTVYG DRKILMFGGL AKNGTLRFRS NDVYTMDLSE DEPSWRPVIG
501: YGSSLPGGMA APPPRLDHVA ISLPGGRILI FGGSVAGLDS ASQLYLLDPN EEKPAWRILN VQGGPPRFAW GHTTCVVGGT RLVVLGGQTG EEWMLNEAHE
601: LLLATSTTAS T

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.