Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY39129 | Canola | cytosol | 98.35 | 98.35 |
| AT2G18915.2 | Thale cress | nucleus | 84.18 | 83.63 |
| CDY39128 | Canola | nucleus | 82.7 | 83.11 |
| CDX82603 | Canola | nucleus | 83.69 | 82.6 |
| CDY39127 | Canola | nucleus | 83.36 | 82.01 |
| CDY49135 | Canola | nucleus | 81.55 | 81.95 |
| KRH12251 | Soybean | cytosol | 70.84 | 70.38 |
| KRH37279 | Soybean | cytosol | 71.17 | 70.36 |
| KRH02848 | Soybean | cytosol | 71.0 | 69.85 |
| KRH19039 | Soybean | cytosol | 70.51 | 69.37 |
| VIT_11s0052g00720.t01 | Wine grape | cytosol | 7.74 | 37.01 |
| Solyc07g017740.2.1 | Tomato | cytosol | 7.74 | 30.32 |
| CDY32406 | Canola | cytosol, endoplasmic reticulum, plastid | 16.31 | 21.43 |
| CDX82216 | Canola | cytosol, endoplasmic reticulum, plastid | 16.14 | 21.17 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:19.2.2.8.1.4.4 | Gene3D:2.120.10.80 | MapMan:26.1.2.3.1 | Gene3D:3.30.450.20 | EnsemblPlants:CDX82604 |
| ProteinID:CDX82604 | ProteinID:CDX82604.1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | EnsemblPlantsGene:GSBRNA2T00137783001 | InterPro:IPR000014 | InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller |
| InterPro:PAS | InterPro:PAS-like_dom_sf | PFAM:PF12937 | PFAM:PF13415 | PFAM:PF13418 | PFAM:PF13426 |
| PFscan:PS50112 | PFscan:PS50181 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF348 | SUPFAM:SSF117281 | SUPFAM:SSF55785 |
| SUPFAM:SSF81383 | TIGRFAMs:TIGR00229 | UniParc:UPI0004EBF270 | : | : | : |
Description
BnaC07g02620D
Coordinates
chrLK031829:-:191816..194219
Molecular Weight (calculated)
66779.9 Da
IEP (calculated)
7.615
GRAVY (calculated)
-0.188
Length
607 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCMKNQMEW DSDFDLSGGD NGPIPFPLSS QPKTATFGFV VSDALDPNHP IIYVNTVFEI ITGYRADEVI GKNCRFLQCR GPYAKRRHPS VDSTVVSKMR
101: RCLEKGIEFQ GELLNFRKDG SPLMNKLRLV PIREDDEITH IIGVLFFTDA KLAPSPAKEI TRKRDPSFTS ASPVGERNVS RGLCGIFELS DEVMAYRILS
201: RLTPRDIASV GCVCRRFNEL TKNDDVWRMV CQNTWGSEAT RVLETAPGAK RIGWVRLARE FTTHEATAWR KFSVGGIVQP SRCNFSTCAV GNKIVIFGGE
301: GVNMQPMNDT FVLDLGSTSP EWKSVLVSSP PPGRWGHTLS CVNGSRLVVF GGYGSHGLLN DVFLLDLDAD PPTWREVSGL APPIPRSWHS SCTLDGTKLI
401: VSGGCADSGA LLNDTFLLDL SMDIPTWREI RVPWSPPSRL GHTLTVYGDR KILMFGGLAE YGSRRFRSND AYTMNLSENE PCWRPLVGYG TSLPGGVAAP
501: RLDHVAISLP GGQILIFGGS VAGLDSASQL YLLDPTEEKP AWRVLNVKGS SPQFAWGHTT CVVGGTRLVV FGGQTGEEWM LNEAHELLLA NSSTKITSSR
601: HGEKRLF
101: RCLEKGIEFQ GELLNFRKDG SPLMNKLRLV PIREDDEITH IIGVLFFTDA KLAPSPAKEI TRKRDPSFTS ASPVGERNVS RGLCGIFELS DEVMAYRILS
201: RLTPRDIASV GCVCRRFNEL TKNDDVWRMV CQNTWGSEAT RVLETAPGAK RIGWVRLARE FTTHEATAWR KFSVGGIVQP SRCNFSTCAV GNKIVIFGGE
301: GVNMQPMNDT FVLDLGSTSP EWKSVLVSSP PPGRWGHTLS CVNGSRLVVF GGYGSHGLLN DVFLLDLDAD PPTWREVSGL APPIPRSWHS SCTLDGTKLI
401: VSGGCADSGA LLNDTFLLDL SMDIPTWREI RVPWSPPSRL GHTLTVYGDR KILMFGGLAE YGSRRFRSND AYTMNLSENE PCWRPLVGYG TSLPGGVAAP
501: RLDHVAISLP GGQILIFGGS VAGLDSASQL YLLDPTEEKP AWRVLNVKGS SPQFAWGHTT CVVGGTRLVV FGGQTGEEWM LNEAHELLLA NSSTKITSSR
601: HGEKRLF
001: MQNQMEWDSD SDLSGGDEVA EDGWFGGDNG AIPFPVGSLP GTAPCGFVVS DALEPDNPII YVNTVFEIVT GYRAEEVIGR NCRFLQCRGP FTKRRHPMVD
101: STIVAKMRQC LENGIEFQGE LLNFRKDGSP LMNKLRLVPI REEDEITHFI GVLLFTDAKI DLGPSPDLSA KEIPRISRSF TSALPIGERN VSRGLCGIFE
201: LSDEVIAIKI LSQLTPGDIA SVGCVCRRLN ELTKNDDVWR MVCQNTWGTE ATRVLESVPG AKRIGWVRLA REFTTHEATA WRKFSVGGTV EPSRCNFSAC
301: AVGNRIVIFG GEGVNMQPMN DTFVLDLGSS SPEWKSVLVS SPPPGRWGHT LSCVNGSRLV VFGGYGSHGL LNDVFLLDLD ADPPSWREVS GLAPPIPRSW
401: HSSCTLDGTK LIVSGGCADS GALLSDTFLL DLSMDIPAWR EIPVPWTPPS RLGHTLTVYG DRKILMFGGL AKNGTLRFRS NDVYTMDLSE DEPSWRPVIG
501: YGSSLPGGMA APPPRLDHVA ISLPGGRILI FGGSVAGLDS ASQLYLLDPN EEKPAWRILN VQGGPPRFAW GHTTCVVGGT RLVVLGGQTG EEWMLNEAHE
601: LLLATSTTAS T
101: STIVAKMRQC LENGIEFQGE LLNFRKDGSP LMNKLRLVPI REEDEITHFI GVLLFTDAKI DLGPSPDLSA KEIPRISRSF TSALPIGERN VSRGLCGIFE
201: LSDEVIAIKI LSQLTPGDIA SVGCVCRRLN ELTKNDDVWR MVCQNTWGTE ATRVLESVPG AKRIGWVRLA REFTTHEATA WRKFSVGGTV EPSRCNFSAC
301: AVGNRIVIFG GEGVNMQPMN DTFVLDLGSS SPEWKSVLVS SPPPGRWGHT LSCVNGSRLV VFGGYGSHGL LNDVFLLDLD ADPPSWREVS GLAPPIPRSW
401: HSSCTLDGTK LIVSGGCADS GALLSDTFLL DLSMDIPAWR EIPVPWTPPS RLGHTLTVYG DRKILMFGGL AKNGTLRFRS NDVYTMDLSE DEPSWRPVIG
501: YGSSLPGGMA APPPRLDHVA ISLPGGRILI FGGSVAGLDS ASQLYLLDPN EEKPAWRILN VQGGPPRFAW GHTTCVVGGT RLVVLGGQTG EEWMLNEAHE
601: LLLATSTTAS T
Arabidopsis Description
ADO2Adagio protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8W420]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.