CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH19039	Soybean	cytosol	97.57	97.57
KRH12251	Soybean	cytosol	90.76	91.65
KRH37279	Soybean	cytosol	89.3	89.74
VIT_11s0052g00730.t01	Wine grape	cytosol	79.25	88.27
Solyc07g017750.2.1	Tomato	mitochondrion	73.42	82.21
AT5G57360.2	Thale cress	nucleus	82.82	81.63
CDY39128	Canola	nucleus	72.77	74.34
CDY49135	Canola	nucleus	71.96	73.51
CDX82603	Canola	nucleus	73.26	73.5
Bra038831.1-P	Field mustard	nucleus	73.1	73.21
CDY39127	Canola	nucleus	72.29	72.29
Bra038830.1-P	Field mustard	nucleus	72.12	72.12
CDY39129	Canola	cytosol	70.34	71.5
Bra038832.1-P	Field mustard	cytosol	70.18	71.22
CDX82604	Canola	cytosol	69.85	71.0
KRH60424	Soybean	cytosol	64.67	64.35
KRH41723	Soybean	cytosol, extracellular, nucleus	63.86	60.9
KRH47295	Soybean	endoplasmic reticulum, plasma membrane, plastid	17.34	23.41
KRH44610	Soybean	endoplasmic reticulum, nucleus, peroxisome	15.72	22.05

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.4	Gene3D:2.120.10.80	MapMan:26.1.2.3.1	Gene3D:3.30.450.20	EMBL:ACUP02010328
InterPro:F-box-like_dom_sf	InterPro:F-box_dom	EnsemblPlantsGene:GLYMA_17G062000	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:Gal_Oxase/kelch_b-propeller	UniProt:I1MSP6	InterPro:IPR000014	InterPro:IPR001810	InterPro:IPR015915	EnsemblPlants:KRH02848
ProteinID:KRH02848	ProteinID:KRH02848.1	InterPro:Kelch-typ_b-propeller	InterPro:Kelch_2	InterPro:PAS	InterPro:PAS-like_dom_sf
PFAM:PF07646	PFAM:PF12937	PFAM:PF13415	PFAM:PF13418	PFAM:PF13426	PFscan:PS50112
PFscan:PS50181	PANTHER:PTHR23244	PANTHER:PTHR23244:SF421	SUPFAM:SSF50965	SUPFAM:SSF55785	SUPFAM:SSF81383
TIGRFAMs:TIGR00229	UniParc:UPI00023D513F	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:4744851..4749357

Molecular Weight (calculated)

67037.1 Da

IEP (calculated)

5.176

GRAVY (calculated)

-0.066

Length

617 amino acids

Sequence
(BLAST)

001: MEWDSNSDLS GDEEEEGFVF NDADDAGPLP FPFPVVENLL QTAPCGFVVT DALDPDHPII YVNTVFEIVT GYCAEDVLGR NCRFLQCRGP FAKRRHPLVD
101: STVVSEIRRC LEEGIEFQGE LLNFRKDGSP LMNRLRLTPI YGDDETITHV IGIQFFTEAN IDLGPVPGST IKESAKSSDR FRSVLSSLQT LPVGDRNVSR
201: GVCGIFQLSD EVLSLKILAR LTPRDIASVS SVCRRLYELT KNEDLWRMVC QNAWGSETTR VLETVPGARG LGWGRLAREL TTLEAAAWRK LTVGGAVEPS
301: RCNFSACAVG NRVVLFGGEG VNMQPMNDTF VLDLNSSNPE WQHVHVSSPP PGRWGHTLSC VNGSHLVVFG GCGRQGLLND VFVLDLDAKP PTWREISGLA
401: PPLPRSWHSS CTLDGTKLIV SGGCADSGVL LSDTFLLDLS MEKPVWREIP VAWTPPSRLG HTLSVYGGRK ILMFGGLAKS GPLRFRSSDV FTMDLSEEEP
501: CWRCVTGSGM LGAGNPGGTA PPPRLDHVAV SLPGGRILIF GGSVAGLHSA SQLYILDPTD EKPTWRILNV PGCPPRFAWG HSTCVVGGTR AIVLGGQTGE
601: EWMLSELHEL SLASSAI

Best Arabidopsis Sequence Match ( AT5G57360.1 )
(BLAST)

001: MEWDSGSDLS ADDASSLADD EEGGLFPGGG PIPYPVGNLL HTAPCGFVVT DAVEPDQPII YVNTVFEMVT GYRAEEVLGG NCRFLQCRGP FAKRRHPLVD
101: SMVVSEIRKC IDEGIEFQGE LLNFRKDGSP LMNRLRLTPI YGDDDTITHI IGIQFFIETD IDLGPVLGSS TKEKSIDGIY SALAAGERNV SRGMCGLFQL
201: SDEVVSMKIL SRLTPRDVAS VSSVCRRLYV LTKNEDLWRR VCQNAWGSET TRVLETVPGA KRLGWGRLAR ELTTLEAAAW RKLSVGGSVE PSRCNFSACA
301: VGNRVVLFGG EGVNMQPMND TFVLDLNSDY PEWQHVKVSS PPPGRWGHTL TCVNGSNLVV FGGCGQQGLL NDVFVLNLDA KPPTWREISG LAPPLPRSWH
401: SSCTLDGTKL IVSGGCADSG VLLSDTFLLD LSIEKPVWRE IPAAWTPPSR LGHTLSVYGG RKILMFGGLA KSGPLKFRSS DVFTMDLSEE EPCWRCVTGS
501: GMPGAGNPGG VAPPPRLDHV AVNLPGGRIL IFGGSVAGLH SASQLYLLDP TEDKPTWRIL NIPGRPPRFA WGHGTCVVGG TRAIVLGGQT GEEWMLSELH
601: ELSLASYLT

Arabidopsis Description

ZTLGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KAN2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.