Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g017750.2.1 | Tomato | mitochondrion | 79.78 | 80.22 |
| KRH19039 | Soybean | cytosol | 88.45 | 79.42 |
| KRH12251 | Soybean | cytosol | 87.55 | 79.38 |
| KRH02848 | Soybean | cytosol | 88.27 | 79.25 |
| KRH37279 | Soybean | cytosol | 87.18 | 78.66 |
| VIT_04s0008g02490.t01 | Wine grape | nucleus | 85.2 | 77.0 |
| AT5G57360.2 | Thale cress | nucleus | 80.51 | 71.25 |
| VIT_01s0011g05810.t01 | Wine grape | cytosol | 65.7 | 59.09 |
| VIT_09s0054g00610.t01 | Wine grape | plastid | 20.58 | 24.1 |
| VIT_11s0052g00720.t01 | Wine grape | cytosol | 0.9 | 3.94 |
Protein Annotations
| Gene3D:1.20.1280.50 | EntrezGene:100244508 | wikigene:100244508 | MapMan:19.2.2.8.1.4.4 | Gene3D:2.120.10.80 | MapMan:26.1.2.3.1 |
| Gene3D:3.30.450.20 | ProteinID:CCB44664 | ProteinID:CCB44664.1 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | UniProt:F6GXH8 |
| EMBL:FN594964 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:Gal_Oxase/kelch_b-propeller | InterPro:IPR001810 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_2 | EntrezGene:LOC100244508 | wikigene:LOC100244508 | InterPro:PAS-like_dom_sf |
| PFAM:PF07646 | PFAM:PF12937 | PFAM:PF13418 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF421 | SUPFAM:SSF50965 |
| SUPFAM:SSF55785 | SUPFAM:SSF81383 | TIGR:TC69570 | UniParc:UPI0002108C52 | ArrayExpress:VIT_11s0052g00730 | EnsemblPlantsGene:VIT_11s0052g00730 |
| EnsemblPlants:VIT_11s0052g00730.t01 | unigene:Vvi.3941 | RefSeq:XP_002269105 | RefSeq:XP_002269105.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr11:+:18287912..18290912
Molecular Weight (calculated)
60256.5 Da
IEP (calculated)
8.097
GRAVY (calculated)
-0.119
Length
554 amino acids
Sequence
(BLAST)
(BLAST)
001: MAINKLRNAN PNPHGLMWDR FLQYRGPFAK RRHPLVDSTV VSEIRRCLED GVEFHGDLLN FRKDGSPLMN RLRLTPIYGD DETITHVIGI QFFTEANIDL
101: GPLPGSLAKE SARSSGRFRS GFPSYPSVPA GNRNICRGVC GIMQLSDEVL SLKILSLLTP RDIASIGSVC RRFYEITKNE DLWRMVCQNA WGSETTRVLE
201: TVPGAKQLGW GRLARELTTL EAAAWRKLTV GGAVEPSRCN FSACAVGSRV VLFGGEGVNM QPMNDTFVLD LNSSNPEWQH VQVNSPPPGR WGHTLTCVNG
301: SNLVVFGGCG RQGLLNDVFV LDLDAKPPAW REISGLAPPL PRSWHSSCTL DGTKLIVSGG CADSGVLLSD TFLLDLSMEK PIWREIPVAW SPPSRLGHTL
401: SVYGGRKILM FGGLAKSGPL RFRSSDVYTM DLSEDNPCWR CVTGSGMPGA GNPAGIAPPP RLDHVAVSLP GGRILIFGGS VAGLHSASQL YLLDPTDEKP
501: TWRILNVPGR PPRFAWGHST CVVGGTRAIV LGGQTGEEWM LSELHELSLA SSVT
101: GPLPGSLAKE SARSSGRFRS GFPSYPSVPA GNRNICRGVC GIMQLSDEVL SLKILSLLTP RDIASIGSVC RRFYEITKNE DLWRMVCQNA WGSETTRVLE
201: TVPGAKQLGW GRLARELTTL EAAAWRKLTV GGAVEPSRCN FSACAVGSRV VLFGGEGVNM QPMNDTFVLD LNSSNPEWQH VQVNSPPPGR WGHTLTCVNG
301: SNLVVFGGCG RQGLLNDVFV LDLDAKPPAW REISGLAPPL PRSWHSSCTL DGTKLIVSGG CADSGVLLSD TFLLDLSMEK PIWREIPVAW SPPSRLGHTL
401: SVYGGRKILM FGGLAKSGPL RFRSSDVYTM DLSEDNPCWR CVTGSGMPGA GNPAGIAPPP RLDHVAVSLP GGRILIFGGS VAGLHSASQL YLLDPTDEKP
501: TWRILNVPGR PPRFAWGHST CVVGGTRAIV LGGQTGEEWM LSELHELSLA SSVT
001: MEWDSGSDLS ADDASSLADD EEGGLFPGGG PIPYPVGNLL HTAPCGFVVT DAVEPDQPII YVNTVFEMVT GYRAEEVLGG NCRFLQCRGP FAKRRHPLVD
101: SMVVSEIRKC IDEGIEFQGE LLNFRKDGSP LMNRLRLTPI YGDDDTITHI IGIQFFIETD IDLGPVLGSS TKEKSIDGIY SALAAGERNV SRGMCGLFQL
201: SDEVVSMKIL SRLTPRDVAS VSSVCRRLYV LTKNEDLWRR VCQNAWGSET TRVLETVPGA KRLGWGRLAR ELTTLEAAAW RKLSVGGSVE PSRCNFSACA
301: VGNRVVLFGG EGVNMQPMND TFVLDLNSDY PEWQHVKVSS PPPGRWGHTL TCVNGSNLVV FGGCGQQGLL NDVFVLNLDA KPPTWREISG LAPPLPRSWH
401: SSCTLDGTKL IVSGGCADSG VLLSDTFLLD LSIEKPVWRE IPAAWTPPSR LGHTLSVYGG RKILMFGGLA KSGPLKFRSS DVFTMDLSEE EPCWRCVTGS
501: GMPGAGNPGG VAPPPRLDHV AVNLPGGRIL IFGGSVAGLH SASQLYLLDP TEDKPTWRIL NIPGRPPRFA WGHGTCVVGG TRAIVLGGQT GEEWMLSELH
601: ELSLASYLT
101: SMVVSEIRKC IDEGIEFQGE LLNFRKDGSP LMNRLRLTPI YGDDDTITHI IGIQFFIETD IDLGPVLGSS TKEKSIDGIY SALAAGERNV SRGMCGLFQL
201: SDEVVSMKIL SRLTPRDVAS VSSVCRRLYV LTKNEDLWRR VCQNAWGSET TRVLETVPGA KRLGWGRLAR ELTTLEAAAW RKLSVGGSVE PSRCNFSACA
301: VGNRVVLFGG EGVNMQPMND TFVLDLNSDY PEWQHVKVSS PPPGRWGHTL TCVNGSNLVV FGGCGQQGLL NDVFVLNLDA KPPTWREISG LAPPLPRSWH
401: SSCTLDGTKL IVSGGCADSG VLLSDTFLLD LSIEKPVWRE IPAAWTPPSR LGHTLSVYGG RKILMFGGLA KSGPLKFRSS DVFTMDLSEE EPCWRCVTGS
501: GMPGAGNPGG VAPPPRLDHV AVNLPGGRIL IFGGSVAGLH SASQLYLLDP TEDKPTWRIL NIPGRPPRFA WGHGTCVVGG TRAIVLGGQT GEEWMLSELH
601: ELSLASYLT
Arabidopsis Description
ZTLGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KAN2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.