Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 4
- nucleus 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g017740.2.1 | Tomato | cytosol | 44.09 | 36.13 |
| VIT_04s0008g02490.t01 | Wine grape | nucleus | 48.03 | 9.95 |
| CDY49135 | Canola | nucleus | 43.31 | 9.11 |
| AT2G18915.2 | Thale cress | nucleus | 43.31 | 9.0 |
| CDY39128 | Canola | nucleus | 42.52 | 8.94 |
| Bra038830.1-P | Field mustard | nucleus | 43.31 | 8.91 |
| CDX82603 | Canola | nucleus | 42.52 | 8.78 |
| CDY39127 | Canola | nucleus | 42.52 | 8.75 |
| Bra038831.1-P | Field mustard | nucleus | 40.94 | 8.44 |
| CDY39129 | Canola | cytosol | 39.37 | 8.24 |
| Bra038832.1-P | Field mustard | cytosol | 39.37 | 8.22 |
| CDX82604 | Canola | cytosol | 37.01 | 7.74 |
| VIT_01s0011g05810.t01 | Wine grape | cytosol | 28.35 | 5.84 |
| VIT_09s0054g00610.t01 | Wine grape | plastid | 6.3 | 1.69 |
| VIT_11s0052g00730.t01 | Wine grape | cytosol | 3.94 | 0.9 |
Protein Annotations
| ArrayExpress:VIT_11s0052g00720 | EMBL:FN594964 | EnsemblPlants:VIT_11s0052g00720.t01 | EnsemblPlantsGene:VIT_11s0052g00720 | Gene3D:3.30.450.20 | InterPro:IPR000014 |
| InterPro:PAS | InterPro:PAS-like_dom_sf | PFAM:PF13426 | PFscan:PS50112 | ProteinID:CCB44665 | ProteinID:CCB44665.1 |
| SUPFAM:SSF55785 | TIGRFAMs:TIGR00229 | UniParc:UPI0002108F76 | UniProt:F6GXH9 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr11:+:18261062..18262861
Molecular Weight (calculated)
14628.1 Da
IEP (calculated)
3.850
GRAVY (calculated)
-0.338
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWDSNSDLS GDEEEEGFLL SDGGPLPFPA EGLVQTAPCG FVVTDALEPD HPIIYVNTMF EMVTGYQAEE VLGRNWWEEF NKRVGFMVRN GRKVKFWEDR
101: LYGDEFMEEA FPELFSITFA KDAWVNL
101: LYGDEFMEEA FPELFSITFA KDAWVNL
001: MEWDSGSDLS ADDASSLADD EEGGLFPGGG PIPYPVGNLL HTAPCGFVVT DAVEPDQPII YVNTVFEMVT GYRAEEVLGG NCRFLQCRGP FAKRRHPLVD
101: SMVVSEIRKC IDEGIEFQGE LLNFRKDGSP LMNRLRLTPI YGDDDTITHI IGIQFFIETD IDLGPVLGSS TKEKSIDGIY SALAAGERNV SRGMCGLFQL
201: SDEVVSMKIL SRLTPRDVAS VSSVCRRLYV LTKNEDLWRR VCQNAWGSET TRVLETVPGA KRLGWGRLAR ELTTLEAAAW RKLSVGGSVE PSRCNFSACA
301: VGNRVVLFGG EGVNMQPMND TFVLDLNSDY PEWQHVKVSS PPPGRWGHTL TCVNGSNLVV FGGCGQQGLL NDVFVLNLDA KPPTWREISG LAPPLPRSWH
401: SSCTLDGTKL IVSGGCADSG VLLSDTFLLD LSIEKPVWRE IPAAWTPPSR LGHTLSVYGG RKILMFGGLA KSGPLKFRSS DVFTMDLSEE EPCWRCVTGS
501: GMPGAGNPGG VAPPPRLDHV AVNLPGGRIL IFGGSVAGLH SASQLYLLDP TEDKPTWRIL NIPGRPPRFA WGHGTCVVGG TRAIVLGGQT GEEWMLSELH
601: ELSLASYLT
101: SMVVSEIRKC IDEGIEFQGE LLNFRKDGSP LMNRLRLTPI YGDDDTITHI IGIQFFIETD IDLGPVLGSS TKEKSIDGIY SALAAGERNV SRGMCGLFQL
201: SDEVVSMKIL SRLTPRDVAS VSSVCRRLYV LTKNEDLWRR VCQNAWGSET TRVLETVPGA KRLGWGRLAR ELTTLEAAAW RKLSVGGSVE PSRCNFSACA
301: VGNRVVLFGG EGVNMQPMND TFVLDLNSDY PEWQHVKVSS PPPGRWGHTL TCVNGSNLVV FGGCGQQGLL NDVFVLNLDA KPPTWREISG LAPPLPRSWH
401: SSCTLDGTKL IVSGGCADSG VLLSDTFLLD LSIEKPVWRE IPAAWTPPSR LGHTLSVYGG RKILMFGGLA KSGPLKFRSS DVFTMDLSEE EPCWRCVTGS
501: GMPGAGNPGG VAPPPRLDHV AVNLPGGRIL IFGGSVAGLH SASQLYLLDP TEDKPTWRIL NIPGRPPRFA WGHGTCVVGG TRAIVLGGQT GEEWMLSELH
601: ELSLASYLT
Arabidopsis Description
ZTLGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KAN2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.