Factsheet for Solyc07g017740.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0052g00720.t01	Wine grape	cytosol	36.13	44.09
AT2G18915.2	Thale cress	nucleus	38.06	9.66
CDY39128	Canola	nucleus	36.77	9.44
Bra038831.1-P	Field mustard	nucleus	37.42	9.42
CDY49135	Canola	nucleus	36.13	9.27
CDX82603	Canola	nucleus	36.77	9.27
Bra038830.1-P	Field mustard	nucleus	36.13	9.08
CDY39127	Canola	nucleus	35.48	8.91
CDY39129	Canola	cytosol	31.61	8.07
Bra038832.1-P	Field mustard	cytosol	30.97	7.89
CDX82604	Canola	cytosol	30.32	7.74
Solyc01g005300.2.1	Tomato	cytosol	25.16	6.43
Solyc07g017750.2.1	Tomato	mitochondrion	7.74	2.18
Solyc06g063300.2.1	Tomato	endoplasmic reticulum, plastid	1.94	0.49

Protein Annotations

Gene3D:3.30.450.20	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004674	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005886	GO:GO:0006464
GO:GO:0006468	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	GO:GO:0035556	InterPro:IPR000014
UniProt:K4CCI8	InterPro:PAS	InterPro:PAS-like_dom_sf	PFscan:PS50112	PANTHER:PTHR24351	PANTHER:PTHR24351:SF160
SUPFAM:SSF55785	EnsemblPlantsGene:Solyc07g017740.2	EnsemblPlants:Solyc07g017740.2.1	UniParc:UPI000276C1B2	SEG:seg	:

Description

No Description!

Coordinates

chr7:+:7924102..7927333

Molecular Weight (calculated)

16564.1 Da

IEP (calculated)

3.796

GRAVY (calculated)

-0.245

Length

155 amino acids

Sequence
(BLAST)

001: MEWDSNSDLS GEEEDGVIEE EEVEDELEEL GFMLSGGGST LPFPIDSLLQ PAPCGFVVSD VFEPDHPIIY VNSVFEMVTG YRAEEVLGQN CQDGRDIGCK
101: GSFTLVVGHP EIAWSSVGDS MQCKGSQCSV GHSVVGREGM GVGCGSSSTY QSRGR

Best Arabidopsis Sequence Match ( AT5G57360.1 )
(BLAST)

001: MEWDSGSDLS ADDASSLADD EEGGLFPGGG PIPYPVGNLL HTAPCGFVVT DAVEPDQPII YVNTVFEMVT GYRAEEVLGG NCRFLQCRGP FAKRRHPLVD
101: SMVVSEIRKC IDEGIEFQGE LLNFRKDGSP LMNRLRLTPI YGDDDTITHI IGIQFFIETD IDLGPVLGSS TKEKSIDGIY SALAAGERNV SRGMCGLFQL
201: SDEVVSMKIL SRLTPRDVAS VSSVCRRLYV LTKNEDLWRR VCQNAWGSET TRVLETVPGA KRLGWGRLAR ELTTLEAAAW RKLSVGGSVE PSRCNFSACA
301: VGNRVVLFGG EGVNMQPMND TFVLDLNSDY PEWQHVKVSS PPPGRWGHTL TCVNGSNLVV FGGCGQQGLL NDVFVLNLDA KPPTWREISG LAPPLPRSWH
401: SSCTLDGTKL IVSGGCADSG VLLSDTFLLD LSIEKPVWRE IPAAWTPPSR LGHTLSVYGG RKILMFGGLA KSGPLKFRSS DVFTMDLSEE EPCWRCVTGS
501: GMPGAGNPGG VAPPPRLDHV AVNLPGGRIL IFGGSVAGLH SASQLYLLDP TEDKPTWRIL NIPGRPPRFA WGHGTCVVGG TRAIVLGGQT GEEWMLSELH
601: ELSLASYLT

Arabidopsis Description

ZTLGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KAN2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.