Factsheet for Bra038832.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39129	Canola	cytosol	99.51	99.67
AT2G18915.2	Thale cress	nucleus	83.88	83.47
Bra038831.1-P	Field mustard	nucleus	83.55	82.47
Bra038830.1-P	Field mustard	nucleus	83.22	82.01
KRH12251	Soybean	cytosol	70.89	70.54
KRH37279	Soybean	cytosol	71.22	70.52
KRH02848	Soybean	cytosol	71.22	70.18
KRH19039	Soybean	cytosol	70.72	69.69
VIT_11s0052g00720.t01	Wine grape	cytosol	8.22	39.37
Solyc07g017740.2.1	Tomato	cytosol	7.89	30.97
Bra001813.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	16.28	21.52

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.4	Gene3D:2.120.10.80	MapMan:26.1.2.3.1	Gene3D:3.30.450.20	EnsemblPlantsGene:Bra038832
EnsemblPlants:Bra038832.1	EnsemblPlants:Bra038832.1-P	InterPro:F-box-like_dom_sf	InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005654
GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0015030	GO:GO:0042752	InterPro:IPR000014
InterPro:IPR001810	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	UniProt:M4FCL3	InterPro:PAS	InterPro:PAS-like_dom_sf
PFAM:PF12937	PFAM:PF13415	PFAM:PF13418	PFAM:PF13426	PFscan:PS50112	PFscan:PS50181
PANTHER:PTHR23244	PANTHER:PTHR23244:SF348	SUPFAM:SSF117281	SUPFAM:SSF55785	SUPFAM:SSF81383	TIGRFAMs:TIGR00229
UniParc:UPI000254108C	:	:	:	:	:

Description

AT2G18915 (E=6e-306) LKP2, ADO2 | LKP2 (LOV KELCH PROTEIN 2); protein binding / ubiquitin-protein ligase

Coordinates

chrA07:+:1203686..1206012

Molecular Weight (calculated)

66960.2 Da

IEP (calculated)

7.615

GRAVY (calculated)

-0.175

Length

608 amino acids

Sequence
(BLAST)

001: MMSCMKNQME WDSDFDLSGG DNGPIPFPLS SLSKTATFGF VVTDALDPDH PIIYVNTVFE IITGYRADEV IGKNCRFLQC RGPYAKRRHP SVDSTVVSKM
101: RRCLEKGIEF QGELLNFRKD GSPLMNKLRL VPIREDDEIT HIIGVLFFTD AKLAPSPAKE ITRKRDRSFT SASPVGERNV SRGLCGIFEL SDEVMAYRIL
201: SRLTPRDIAS VGCVCRRFNE LTKNDDVWRM VCQNTWGSEA TRVLETAPGA KRIGWVRLAR EFTTHEATAW RKFSVGGVVQ PSRCNFSTCA VGNKIVIFGG
301: EGVNMQPMND TFVLDLGSTT PEWKSVLVSS PPPGRWGHTL SCVNGSRLVV FGGYGSHGLL NDVFLLDLDA DPPTWREVSG LAPPIPRSWH SSCTLDGTKL
401: IVSGGCADSG ALLNDTFLLD LSMDIPTWRE IRVPWSPPSR LGHTLTVYGD RKILMFGGLA EYGSRRFRSN DAYTMNLSEN EPCWRPLVGY GTSLPGGVAA
501: PRLDHVAISL PGGQILIFGG SVAGIDSASQ LYLLDPTEEK PAWRVLNVKG SSPQFAWGHT TCVVGGTRLV VFGGQTGEEW MLNEAHELLL ANSSTKITSS
601: RHGEKRLF

Best Arabidopsis Sequence Match ( AT2G18915.2 )
(BLAST)

001: MQNQMEWDSD SDLSGGDEVA EDGWFGGDNG AIPFPVGSLP GTAPCGFVVS DALEPDNPII YVNTVFEIVT GYRAEEVIGR NCRFLQCRGP FTKRRHPMVD
101: STIVAKMRQC LENGIEFQGE LLNFRKDGSP LMNKLRLVPI REEDEITHFI GVLLFTDAKI DLGPSPDLSA KEIPRISRSF TSALPIGERN VSRGLCGIFE
201: LSDEVIAIKI LSQLTPGDIA SVGCVCRRLN ELTKNDDVWR MVCQNTWGTE ATRVLESVPG AKRIGWVRLA REFTTHEATA WRKFSVGGTV EPSRCNFSAC
301: AVGNRIVIFG GEGVNMQPMN DTFVLDLGSS SPEWKSVLVS SPPPGRWGHT LSCVNGSRLV VFGGYGSHGL LNDVFLLDLD ADPPSWREVS GLAPPIPRSW
401: HSSCTLDGTK LIVSGGCADS GALLSDTFLL DLSMDIPAWR EIPVPWTPPS RLGHTLTVYG DRKILMFGGL AKNGTLRFRS NDVYTMDLSE DEPSWRPVIG
501: YGSSLPGGMA APPPRLDHVA ISLPGGRILI FGGSVAGLDS ASQLYLLDPN EEKPAWRILN VQGGPPRFAW GHTTCVVGGT RLVVLGGQTG EEWMLNEAHE
601: LLLATSTTAS T

Arabidopsis Description

ADO2Adagio protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8W420]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.