Factsheet for Solyc07g017750.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0052g00730.t01	Wine grape	cytosol	80.22	79.78
KRH12251	Soybean	cytosol	83.85	75.61
KRH37279	Soybean	cytosol	82.94	74.43
KRH19039	Soybean	cytosol	82.4	73.58
KRH02848	Soybean	cytosol	82.21	73.42
AT5G57360.2	Thale cress	nucleus	78.4	69.01
Solyc01g005300.2.1	Tomato	cytosol	58.26	52.88
Solyc06g063300.2.1	Tomato	endoplasmic reticulum, plastid	19.6	17.59
Solyc07g017740.2.1	Tomato	cytosol	2.18	7.74

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.4	Gene3D:2.120.10.80	MapMan:26.1.2.3.1	Gene3D:3.30.450.20	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	GO:GO:0000003	GO:GO:0003674	GO:GO:0004871	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829
GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0007623	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009605	GO:GO:0009628	GO:GO:0009791	GO:GO:0009882	GO:GO:0009908
GO:GO:0009987	GO:GO:0010114	GO:GO:0010498	GO:GO:0019005	GO:GO:0019538	GO:GO:0038023
GO:GO:0042752	GO:GO:0043153	InterPro:IPR001810	InterPro:IPR015915	UniProt:K4CCI9	InterPro:Kelch-typ_b-propeller
InterPro:PAS-like_dom_sf	PFAM:PF00646	PFAM:PF13415	PFAM:PF13418	PANTHER:PTHR23244	PANTHER:PTHR23244:SF348
SUPFAM:SSF117281	SUPFAM:SSF55785	SUPFAM:SSF81383	EnsemblPlantsGene:Solyc07g017750.2	EnsemblPlants:Solyc07g017750.2.1	UniParc:UPI000276C1B3
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7:+:7937097..7939889

Molecular Weight (calculated)

59919.2 Da

IEP (calculated)

8.135

GRAVY (calculated)

-0.083

Length

551 amino acids

Sequence
(BLAST)

001: MKGMMTCWNL NQVNRFLQCR GPYAKRRHPL VDSTVITEIR RCIDQGIEFQ GELLNFRKDG SPLMNRLRLT PIYGDGVAIT HILGIQYFQE VNIDLGPLPG
101: SLVKEPTRLL DRYRSSLSLY GPASEGNRSN NHGVCGILQL SDEVLALKIL SLLTPRDIAS VGSVSTRLHE LTKNEDLWRM VCQNAWGSET TRVLEAVPGA
201: KRLGWGRLAR ELTTLEAAAW RKLTVGGTVE PSRCNFSACA VGNRVVLFGG EGVNMQPMND TFVLDLNSSN PEWKHVKVSS PPPGRWGHTL SCVNGSHLVV
301: FGGYGRQGLL NDVFVLDLDA KQPTWREISS LAPPLPRSWH SSCTLDGTKL IVSGGCTDSG VLLSDTFLLD LSIEKPVWRE IAVTWTPPSR LGHTLSVYGG
401: RKILMFGGLA KSGPVRFRSS DVFTLDLSEE EPCWRCVTGS GMPGAGNPGG LAPSPRLDHV ALSLPGGRVL VFGGSITSGL HSGSQLYILD PTEEKPTWRI
501: LNVTGRAPSI AWGHNTCVVG GTRAIVIGGQ TGEDWMLGEL HELSLASSVV V

Best Arabidopsis Sequence Match ( AT5G57360.1 )
(BLAST)

001: MEWDSGSDLS ADDASSLADD EEGGLFPGGG PIPYPVGNLL HTAPCGFVVT DAVEPDQPII YVNTVFEMVT GYRAEEVLGG NCRFLQCRGP FAKRRHPLVD
101: SMVVSEIRKC IDEGIEFQGE LLNFRKDGSP LMNRLRLTPI YGDDDTITHI IGIQFFIETD IDLGPVLGSS TKEKSIDGIY SALAAGERNV SRGMCGLFQL
201: SDEVVSMKIL SRLTPRDVAS VSSVCRRLYV LTKNEDLWRR VCQNAWGSET TRVLETVPGA KRLGWGRLAR ELTTLEAAAW RKLSVGGSVE PSRCNFSACA
301: VGNRVVLFGG EGVNMQPMND TFVLDLNSDY PEWQHVKVSS PPPGRWGHTL TCVNGSNLVV FGGCGQQGLL NDVFVLNLDA KPPTWREISG LAPPLPRSWH
401: SSCTLDGTKL IVSGGCADSG VLLSDTFLLD LSIEKPVWRE IPAAWTPPSR LGHTLSVYGG RKILMFGGLA KSGPLKFRSS DVFTMDLSEE EPCWRCVTGS
501: GMPGAGNPGG VAPPPRLDHV AVNLPGGRIL IFGGSVAGLH SASQLYLLDP TEDKPTWRIL NIPGRPPRFA WGHGTCVVGG TRAIVLGGQT GEEWMLSELH
601: ELSLASYLT

Arabidopsis Description

ZTLGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KAN2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.