CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane

Predictor Summary:

nucleus 2
cytosol 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44610	Soybean	endoplasmic reticulum, nucleus, peroxisome	86.21	89.55
VIT_09s0054g00610.t01	Wine grape	plastid	63.68	61.52
PGSC0003DMT400068170	Potato	endoplasmic reticulum, plasma membrane, plastid	61.05	59.87
AT1G51550.1	Thale cress	plastid	57.33	54.81
Bra001813.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	55.14	54.78
CDY32406	Canola	cytosol, endoplasmic reticulum, plastid	54.27	53.68
CDX82216	Canola	cytosol, endoplasmic reticulum, plastid	54.27	53.56
Os08t0230300-00	Rice	cytosol, endoplasmic reticulum, nucleus	49.67	50.67
TraesCS7B01G197900.1	Wheat	cytosol	47.92	49.32
TraesCS7A01G291800.1	Wheat	cytosol	47.92	49.32
TraesCS7D01G290000.1	Wheat	cytosol	47.7	49.1
HORVU7Hr1G067710.13	Barley	cytosol	47.48	48.44
GSMUA_Achr1P23600_001	Banana	plastid	52.52	46.42
Solyc06g063300.2.1	Tomato	endoplasmic reticulum, plastid	60.83	45.28
Zm00001d024365_P001	Maize	cytosol, nucleus, peroxisome	48.8	44.96
OQU80127	Sorghum	cytosol, nucleus, peroxisome	49.02	43.41
KRH02848	Soybean	cytosol	23.41	17.34
KRH19039	Soybean	cytosol	23.19	17.18
KRH12251	Soybean	cytosol	22.76	17.02
KRH37279	Soybean	cytosol	22.54	16.78
KRH60424	Soybean	cytosol	22.1	16.29
KRH41723	Soybean	cytosol, extracellular, nucleus	21.88	15.46

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.6	Gene3D:2.120.10.80	EMBL:ACUP02004144	InterPro:F-box-like_dom_sf	InterPro:F-box_dom
EnsemblPlantsGene:GLYMA_07G020700	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1KGQ0	InterPro:IPR001810
InterPro:IPR015915	EnsemblPlants:KRH47295	ProteinID:KRH47295	ProteinID:KRH47295.1	InterPro:Kelch-typ_b-propeller	PFAM:PF13415
PFAM:PF13418	PFscan:PS50181	PANTHER:PTHR23244	PANTHER:PTHR23244:SF324	SUPFAM:SSF117281	SUPFAM:SSF81383
UniParc:UPI0002958506	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:1616654..1619548

Molecular Weight (calculated)

51000.0 Da

IEP (calculated)

7.827

GRAVY (calculated)

-0.168

Length

457 amino acids

Sequence
(BLAST)

001: MEESEGSTSG NHSYSSCGSP ISNMAQDYLF TILLLLPIDA ILSLSITCKR FRALTSSHTL WKSLCKRDLG STCVDSLSSN NQHRHFPWMR LYKQVSQMDS
101: VCCHKLLVSD LDFPAARASH SLNFVSDCLV LFGGGCEGGR HLDDTWVAYI GNDFRRMLKW QTVHSGIPSG RFGHTCVEMG DYLVLFGGIN DRGNRKNDTW
201: LGHVMFNENN GVTFSWKMLD VGNVAPPSRG AHAACCIDEK RMIIHGGIGL NGLRLGDTWV LEMSDSHCFG TWHEIVAHPS PPPRSGHTLT CIGRSRTILF
301: GGRGLGYEVL DDVWLLDTYQ GYQRWVQIVY DLQSIPAGVS LPRVGHTATL VLGGRLLIYG GEDSYRQRKD DFWVLDISAI PYPCITQQIT VSSKKVLTRM
401: WKRWKSSGHA ANSRSFHRAC ADRSGRYVYV FGGMVDGFLQ PAEPSGLRFD GELFLVE

Best Arabidopsis Sequence Match ( AT1G51550.1 )
(BLAST)

001: MAAESTRNSS PPSTSQSSSP IINLPDDHLL TILLLLPVDS ILSFSMTCKR YKSLACSDSL WEALCEREWG PTSVDALKLS SLRDGFSWML MFQRVYKMDS
101: VCCHKISDPD DDDEESSSFP IPRASHSLNF VNDHLVLFGG GCQGGRHLDD TWTSYVDKSN QSILKWKKVK SGTPSGRFGH TCIVIGEYLL LFGGINDRGE
201: RLNDTWIGQV FCHEGLSWKL LNVGSLQRPR PPPRGAHSAC CIAEKKMVVH GGIGLNGVRL GDTWILELSE DFSSGTWHMV ESPQLPPPRS GHTLTCIREN
301: QVVLFGGRGL GYDVLDDVWI LDIQEPCEEK WIQIFYDFQD VPEYASLPRV GHSATLVLGG RILIYGGEDS YRHRKDDFWV LDVKTIPSSG LKPQGLSLNG
401: SSVWKKLDRI SYGPKSRSFH RACADCSGRF LYVFGGMVDG LLQPAASSGL RFDGELFMVE LVLGFSDLDH QQRPGKSM

Arabidopsis Description

F-box/kelch-repeat protein At1g51550 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8K7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.