Factsheet for Os08t0230300-00

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, nucleus, cytosol

Predictor Summary:

nucleus 3
extracellular 2
endoplasmic reticulum 3
vacuole 2
plasma membrane 2
golgi 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, nucleus
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G291800.1	Wheat	cytosol	76.34	77.03
TraesCS7D01G290000.1	Wheat	cytosol	76.12	76.8
TraesCS7B01G197900.1	Wheat	cytosol	75.45	76.13
HORVU7Hr1G067710.13	Barley	cytosol	75.89	75.89
Zm00001d024365_P001	Maize	cytosol, nucleus, peroxisome	80.58	72.78
OQU80127	Sorghum	cytosol, nucleus, peroxisome	80.36	69.77
GSMUA_Achr1P23600_001	Banana	plastid	57.59	49.9
PGSC0003DMT400068170	Potato	endoplasmic reticulum, plasma membrane, plastid	51.79	49.79
KRH47295	Soybean	endoplasmic reticulum, plasma membrane, plastid	50.67	49.67
KRH44610	Soybean	endoplasmic reticulum, nucleus, peroxisome	48.21	49.09
VIT_09s0054g00610.t01	Wine grape	plastid	51.56	48.84
Bra001813.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	48.88	47.61
AT1G51550.1	Thale cress	plastid	50.45	47.28
CDY32406	Canola	cytosol, endoplasmic reticulum, plastid	48.66	47.19
CDX82216	Canola	cytosol, endoplasmic reticulum, plastid	48.66	47.08
Solyc06g063300.2.1	Tomato	endoplasmic reticulum, plastid	51.79	37.78
Os02t0150800-01	Rice	cytosol	23.66	17.01
Os11t0547000-01	Rice	cytosol	23.88	16.98
Os06t0694000-01	Rice	cytosol	23.21	16.51

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.6	Gene3D:2.120.10.80	EntrezGene:4344994	ProteinID:BAD01248.1	ProteinID:BAD01409.1
ProteinID:BAT04426.1	InterPro:F-box-like_dom_sf	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR015915
InterPro:Kelch-typ_b-propeller	EnsemblPlantsGene:Os08g0230300	EnsemblPlants:Os08t0230300-00	PFAM:PF13418	PFAM:PF13854	PANTHER:PTHR23244
PANTHER:PTHR23244:SF324	UniProt:Q6Z1R8	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI0000212FB9	RefSeq:XP_015650577.1
SEG:seg	:	:	:	:	:

Description

Os_F0765Hypothetical conserved gene. (Os08t0230300-00)

Coordinates

chr8:-:7947639..7951629

Molecular Weight (calculated)

49188.9 Da

IEP (calculated)

8.082

GRAVY (calculated)

-0.144

Length

448 amino acids

Sequence
(BLAST)

001: MEEEAAVARL GCDQVLSILH LLPAESVLSF AAACRAFHAW ASSDALWEAL CRRDWGARAT AALAERRRRG GGGVPWRRIY AEVALLGALS ARRVPVKGAS
101: PRPRASHSLN LVAGWLVLFG GGCEGGRHLD DTWVAYVGNG AGNRSSAVFS WQQLDSGTPS GRFGHSCSIV GDALVLFGGI NDQGQRLNDT WIGQIICEES
201: RRMKISWRLL EVGPHAPYPR GAHAACCVDD KFIVIHGGIG QSGSRLGDTW LLDLSNGLRS GIWHQIEDTE PLPLSRSGHT LTWIGGSRMV LFGGRGSEFD
301: VLNDVWLLDI NERYPKWKEL KYDLSSVLGE MPFPRVGHSA TLVLGGKILV YGGEDSQRRR KDDFWTLDLP ALLQFESGSK KMTKRMWKKL RIDGQCPNYR
401: SFHGACVDTS GCHVYIFGGM VDGLVHPAEA SGLRFDGQLY QVDLVLHL

Best Arabidopsis Sequence Match ( AT1G51550.1 )
(BLAST)

001: MAAESTRNSS PPSTSQSSSP IINLPDDHLL TILLLLPVDS ILSFSMTCKR YKSLACSDSL WEALCEREWG PTSVDALKLS SLRDGFSWML MFQRVYKMDS
101: VCCHKISDPD DDDEESSSFP IPRASHSLNF VNDHLVLFGG GCQGGRHLDD TWTSYVDKSN QSILKWKKVK SGTPSGRFGH TCIVIGEYLL LFGGINDRGE
201: RLNDTWIGQV FCHEGLSWKL LNVGSLQRPR PPPRGAHSAC CIAEKKMVVH GGIGLNGVRL GDTWILELSE DFSSGTWHMV ESPQLPPPRS GHTLTCIREN
301: QVVLFGGRGL GYDVLDDVWI LDIQEPCEEK WIQIFYDFQD VPEYASLPRV GHSATLVLGG RILIYGGEDS YRHRKDDFWV LDVKTIPSSG LKPQGLSLNG
401: SSVWKKLDRI SYGPKSRSFH RACADCSGRF LYVFGGMVDG LLQPAASSGL RFDGELFMVE LVLGFSDLDH QQRPGKSM

Arabidopsis Description

F-box/kelch-repeat protein At1g51550 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8K7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.