Factsheet for TraesCS7D01G290000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G197900.1	Wheat	cytosol	98.42	98.42
TraesCS7A01G291800.1	Wheat	cytosol	98.42	98.42
HORVU7Hr1G067710.13	Barley	cytosol	93.92	93.08
Os08t0230300-00	Rice	cytosol, endoplasmic reticulum, nucleus	76.8	76.12
Zm00001d024365_P001	Maize	cytosol, nucleus, peroxisome	74.1	66.33
OQU80127	Sorghum	cytosol, nucleus, peroxisome	73.87	63.57
PGSC0003DMT400068170	Potato	endoplasmic reticulum, plasma membrane, plastid	50.23	47.85
KRH47295	Soybean	endoplasmic reticulum, plasma membrane, plastid	49.1	47.7
GSMUA_Achr1P23600_001	Banana	plastid	54.73	47.0
KRH44610	Soybean	endoplasmic reticulum, nucleus, peroxisome	45.72	46.14
VIT_09s0054g00610.t01	Wine grape	plastid	48.87	45.88
Bra001813.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	47.07	45.43
AT1G51550.1	Thale cress	plastid	48.42	44.98
CDX82216	Canola	cytosol, endoplasmic reticulum, plastid	46.85	44.92
CDY32406	Canola	cytosol, endoplasmic reticulum, plastid	46.4	44.59
Solyc06g063300.2.1	Tomato	endoplasmic reticulum, plastid	50.45	36.48
TraesCS6D01G111600.1	Wheat	cytosol	22.07	15.83
TraesCS7D01G423400.1	Wheat	cytosol	22.75	15.78

Protein Annotations

EnsemblPlants:TraesCS7D01G290000.1	EnsemblPlantsGene:TraesCS7D01G290000	Gene3D:1.20.1280.50	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:Gal_Oxase/kelch_b-propeller	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	PANTHER:PTHR23244
PANTHER:PTHR23244:SF324	PFAM:PF13418	PFAM:PF13854	SEG:seg	SUPFAM:SSF50965	SUPFAM:SSF81383
MapMan:19.2.2.8.1.4.6	:	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:337555757..337559566

Molecular Weight (calculated)

49009.9 Da

IEP (calculated)

8.177

GRAVY (calculated)

-0.076

Length

444 amino acids

Sequence
(BLAST)

001: MDAAPVGHLG YDQVLSILRL LPAEAVLSFA ATCRAFRDWA SSDVLWEALC RRDWGARAAA AALADWRCGV PWRRLYAEVA RLSALQALRL QVKGTSPRPR
101: ASHSINLVAG WLVVFGGGCE GGRHLDDIWA TYVGNRAGTR SSNALTWQQL ASGTPSGRFG HSCILVGDAL VLFGGINDRG LRLNDTWIGQ IICEEPCRMR
201: ISWRLLEIGP LAPSPRGAHA ACCIDDKFIV IHGGIGVHGS RLGDTWLLDL SDGLQSGSWR RMGDTGPLPS ARSGHTLTWI GDRRMVLFGG RGSEYEVLSD
301: VWLFDIGDHL LQWKEQKYDL SSILGELPSP RAGHSATFLF GGKILVYGGE DKERRRRDDF WILDIPALLQ FESGNRKMAK RMWKKLRIDG QSPNCRSFHG
401: ACVDTSGYCV YLFGGMVDAL LHPAESLGLR FDGQLYQVEL VLHL

Best Arabidopsis Sequence Match ( AT1G51550.1 )
(BLAST)

001: MAAESTRNSS PPSTSQSSSP IINLPDDHLL TILLLLPVDS ILSFSMTCKR YKSLACSDSL WEALCEREWG PTSVDALKLS SLRDGFSWML MFQRVYKMDS
101: VCCHKISDPD DDDEESSSFP IPRASHSLNF VNDHLVLFGG GCQGGRHLDD TWTSYVDKSN QSILKWKKVK SGTPSGRFGH TCIVIGEYLL LFGGINDRGE
201: RLNDTWIGQV FCHEGLSWKL LNVGSLQRPR PPPRGAHSAC CIAEKKMVVH GGIGLNGVRL GDTWILELSE DFSSGTWHMV ESPQLPPPRS GHTLTCIREN
301: QVVLFGGRGL GYDVLDDVWI LDIQEPCEEK WIQIFYDFQD VPEYASLPRV GHSATLVLGG RILIYGGEDS YRHRKDDFWV LDVKTIPSSG LKPQGLSLNG
401: SSVWKKLDRI SYGPKSRSFH RACADCSGRF LYVFGGMVDG LLQPAASSGL RFDGELFMVE LVLGFSDLDH QQRPGKSM

Arabidopsis Description

F-box/kelch-repeat protein At1g51550 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8K7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.