Factsheet for HORVU7Hr1G067710.13

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G291800.1	Wheat	cytosol	93.53	94.37
TraesCS7D01G290000.1	Wheat	cytosol	93.08	93.92
TraesCS7B01G197900.1	Wheat	cytosol	93.08	93.92
Os08t0230300-00	Rice	cytosol, endoplasmic reticulum, nucleus	75.89	75.89
Zm00001d024365_P001	Maize	cytosol, nucleus, peroxisome	72.1	65.12
OQU80127	Sorghum	cytosol, nucleus, peroxisome	71.88	62.4
GSMUA_Achr1P23600_001	Banana	plastid	54.91	47.58
KRH47295	Soybean	endoplasmic reticulum, plasma membrane, plastid	48.44	47.48
PGSC0003DMT400068170	Potato	endoplasmic reticulum, plasma membrane, plastid	49.11	47.21
KRH44610	Soybean	endoplasmic reticulum, nucleus, peroxisome	45.54	46.36
VIT_09s0054g00610.t01	Wine grape	plastid	48.21	45.67
Bra001813.1-P	Field mustard	cytosol, endoplasmic reticulum, plastid	46.21	45.0
CDX82216	Canola	cytosol, endoplasmic reticulum, plastid	45.98	44.49
CDY32406	Canola	cytosol, endoplasmic reticulum, plastid	45.54	44.16
AT1G51550.1	Thale cress	plastid	46.65	43.72
Solyc06g063300.2.1	Tomato	endoplasmic reticulum, plastid	49.33	35.99
HORVU6Hr1G022330.1	Barley	cytosol	22.1	16.07
HORVU7Hr1G099010.1	Barley	cytosol	22.77	15.69

Protein Annotations

EnsemblPlants:HORVU7Hr1G067710.13	EnsemblPlantsGene:HORVU7Hr1G067710	Gene3D:1.20.1280.50	Gene3D:2.120.10.80	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:F-box-like_dom_sf	InterPro:IPR015915	InterPro:Kelch-typ_b-propeller	PANTHER:PTHR23244	PANTHER:PTHR23244:SF324
PFAM:PF13418	PFAM:PF13854	SEG:seg	SUPFAM:SSF117281	SUPFAM:SSF81383	UniParc:UPI000B47F454
UniProt:A0A287WRW7	MapMan:19.2.2.8.1.4.6	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:354914923..354921935

Molecular Weight (calculated)

49268.2 Da

IEP (calculated)

8.076

GRAVY (calculated)

-0.071

Length

448 amino acids

Sequence
(BLAST)

001: MDAGAVGHLG YDQVLSILRL LPAEAVLSFA ATCRAFRDWA SSDVLWEALC RRDWGARAAA AALVDWRCGV PWRRLYAEVA RLSALQARRL QVKGTSPRPR
101: ASHSLNLVAG WLLVFGGGCE GGNCQGRHLD DIWATYVGNG AGTGSSNVLS WQQLASGTPS GRFGHSCVLV GDALVLFGGI NDRGLRLNDT WIGEIICEEP
201: GRMMISWRLL QIGPLAPSPR GAHAACCIDD KLIVIHGGIG VHGSRLGDTW LLDFSDGLRS GSWRQMGDTG PLPSARSGHT LTWIGDRRMV LFGGRGSEYE
301: VLSDVWLFDI GDHFLQWKEQ KYNLSSILGE LPSPRAGHSA TFLFGGKILV YGGEDKERRR MDDFWILDIP ALLQFESGTR KMAKRMWKRL RIDGQSPNCR
401: SFHGACVDTS GYRVYVFGGM VDALMHPAES LGLRFDGQLY QVELVLHL

Best Arabidopsis Sequence Match ( AT1G51550.1 )
(BLAST)

001: MAAESTRNSS PPSTSQSSSP IINLPDDHLL TILLLLPVDS ILSFSMTCKR YKSLACSDSL WEALCEREWG PTSVDALKLS SLRDGFSWML MFQRVYKMDS
101: VCCHKISDPD DDDEESSSFP IPRASHSLNF VNDHLVLFGG GCQGGRHLDD TWTSYVDKSN QSILKWKKVK SGTPSGRFGH TCIVIGEYLL LFGGINDRGE
201: RLNDTWIGQV FCHEGLSWKL LNVGSLQRPR PPPRGAHSAC CIAEKKMVVH GGIGLNGVRL GDTWILELSE DFSSGTWHMV ESPQLPPPRS GHTLTCIREN
301: QVVLFGGRGL GYDVLDDVWI LDIQEPCEEK WIQIFYDFQD VPEYASLPRV GHSATLVLGG RILIYGGEDS YRHRKDDFWV LDVKTIPSSG LKPQGLSLNG
401: SSVWKKLDRI SYGPKSRSFH RACADCSGRF LYVFGGMVDG LLQPAASSGL RFDGELFMVE LVLGFSDLDH QQRPGKSM

Arabidopsis Description

F-box/kelch-repeat protein At1g51550 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8K7]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.