Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G121500.1 | Wheat | cytosol | 96.92 | 96.29 |
| TraesCS6B01G149800.1 | Wheat | cytosol | 96.59 | 96.28 |
| TraesCS6D01G111600.1 | Wheat | cytosol | 94.81 | 94.35 |
| Zm00001d015290_P001 | Maize | cytosol | 82.14 | 83.09 |
| Os02t0150800-01 | Rice | cytosol | 83.6 | 82.66 |
| EES04532 | Sorghum | cytosol | 81.98 | 82.52 |
| Zm00001d000306_P001 | Maize | plastid | 14.29 | 81.48 |
| GSMUA_Achr7P15880_001 | Banana | cytosol | 70.45 | 76.01 |
| HORVU7Hr1G099010.1 | Barley | cytosol | 78.41 | 74.31 |
| VIT_04s0008g02490.t01 | Wine grape | nucleus | 73.54 | 73.9 |
| GSMUA_Achr3P05120_001 | Banana | nucleus | 65.26 | 68.95 |
| HORVU7Hr1G067710.13 | Barley | cytosol | 16.07 | 22.1 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:19.2.2.8.1.4.4 | Gene3D:2.120.10.80 | MapMan:26.1.2.3.1 | Gene3D:3.30.450.20 | EMBL:AK363772 |
| InterPro:Adagio-like_2 | InterPro:F-box-like_dom_sf | InterPro:F-box_dom | UniProt:F2DIQ4 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0008150 | GO:GO:0042752 | InterPro:Gal_Oxase/kelch_b-propeller | EnsemblPlantsGene:HORVU6Hr1G022330 | EnsemblPlants:HORVU6Hr1G022330.1 |
| InterPro:IPR000014 | InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:PAS | InterPro:PAS-like_dom_sf |
| PFAM:PF12937 | PFAM:PF13415 | PFAM:PF13418 | PFAM:PF13426 | PFscan:PS50112 | PANTHER:PTHR23244 |
| PANTHER:PTHR23244:SF302 | SUPFAM:SSF50965 | SUPFAM:SSF55785 | SUPFAM:SSF81383 | TIGRFAMs:TIGR00229 | UniParc:UPI00020065BD |
| SEG:seg | : | : | : | : | : |
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DIQ4]
Coordinates
chrchr6H:+:70576254..70582234
Molecular Weight (calculated)
66746.6 Da
IEP (calculated)
5.359
GRAVY (calculated)
-0.134
Length
616 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWDSDSDGS GEEDEEEEGV GPWGADGCRG GGGFSLAIEG VLGGACGLVV SDALEPDFPI IYVNRGFEDA TGYHAEEVLG RNCRFLQCRG PFAQRRHPLV
101: DAIVVTEIQR CLEEGTEFQG DLLNFRKDGS PFMTSLQLKP IYGDDETITH YMGIQFFNDC NVELGPLPGS MAKEAVRSLW IAPDNTLRPT PTGKGNFCSE
201: YSHLFQLSDE VLCQKILSRL SPRDIASVNS VCKRLYHMTK NDHLWRMVCQ NAWGNDATRA LENVAGTKSL AWGRLARELT TLEAVTWKKL TIGGTVEPSR
301: CNFSACAVGN RVVLFGGEGV NAQPMNDTFV LDLSATKPEW RHVNVGLAPP GRWGHTLSCL SGSLLVLFGG CGGQGLLNDV FILDLDAKHP TWREIFGLTP
401: PVPRSWHSSC TMDGSKLVVS GGCADSGVLL SDTHLLDVTM ERPVWREIPA PWTPPSRLGH SLSVYDGRKI LMFGGLAKSG PLRLRSGDVF TMDLSDAVPS
501: WRCITGSGMP GACNPAGVGP PPRLDHVAVS LPGGRIMIFG GSVAGLHSAS QLYLLDPTEE KPTWRILNVP GRPPRFAWGH STCVMEGSKA IVLGGQTGEE
601: WTLTEIHELS LASSLV
101: DAIVVTEIQR CLEEGTEFQG DLLNFRKDGS PFMTSLQLKP IYGDDETITH YMGIQFFNDC NVELGPLPGS MAKEAVRSLW IAPDNTLRPT PTGKGNFCSE
201: YSHLFQLSDE VLCQKILSRL SPRDIASVNS VCKRLYHMTK NDHLWRMVCQ NAWGNDATRA LENVAGTKSL AWGRLARELT TLEAVTWKKL TIGGTVEPSR
301: CNFSACAVGN RVVLFGGEGV NAQPMNDTFV LDLSATKPEW RHVNVGLAPP GRWGHTLSCL SGSLLVLFGG CGGQGLLNDV FILDLDAKHP TWREIFGLTP
401: PVPRSWHSSC TMDGSKLVVS GGCADSGVLL SDTHLLDVTM ERPVWREIPA PWTPPSRLGH SLSVYDGRKI LMFGGLAKSG PLRLRSGDVF TMDLSDAVPS
501: WRCITGSGMP GACNPAGVGP PPRLDHVAVS LPGGRIMIFG GSVAGLHSAS QLYLLDPTEE KPTWRILNVP GRPPRFAWGH STCVMEGSKA IVLGGQTGEE
601: WTLTEIHELS LASSLV
001: MEWDSGSDLS ADDASSLADD EEGGLFPGGG PIPYPVGNLL HTAPCGFVVT DAVEPDQPII YVNTVFEMVT GYRAEEVLGG NCRFLQCRGP FAKRRHPLVD
101: SMVVSEIRKC IDEGIEFQGE LLNFRKDGSP LMNRLRLTPI YGDDDTITHI IGIQFFIETD IDLGPVLGSS TKEKSIDGIY SALAAGERNV SRGMCGLFQL
201: SDEVVSMKIL SRLTPRDVAS VSSVCRRLYV LTKNEDLWRR VCQNAWGSET TRVLETVPGA KRLGWGRLAR ELTTLEAAAW RKLSVGGSVE PSRCNFSACA
301: VGNRVVLFGG EGVNMQPMND TFVLDLNSDY PEWQHVKVSS PPPGRWGHTL TCVNGSNLVV FGGCGQQGLL NDVFVLNLDA KPPTWREISG LAPPLPRSWH
401: SSCTLDGTKL IVSGGCADSG VLLSDTFLLD LSIEKPVWRE IPAAWTPPSR LGHTLSVYGG RKILMFGGLA KSGPLKFRSS DVFTMDLSEE EPCWRCVTGS
501: GMPGAGNPGG VAPPPRLDHV AVNLPGGRIL IFGGSVAGLH SASQLYLLDP TEDKPTWRIL NIPGRPPRFA WGHGTCVVGG TRAIVLGGQT GEEWMLSELH
601: ELSLASYLT
101: SMVVSEIRKC IDEGIEFQGE LLNFRKDGSP LMNRLRLTPI YGDDDTITHI IGIQFFIETD IDLGPVLGSS TKEKSIDGIY SALAAGERNV SRGMCGLFQL
201: SDEVVSMKIL SRLTPRDVAS VSSVCRRLYV LTKNEDLWRR VCQNAWGSET TRVLETVPGA KRLGWGRLAR ELTTLEAAAW RKLSVGGSVE PSRCNFSACA
301: VGNRVVLFGG EGVNMQPMND TFVLDLNSDY PEWQHVKVSS PPPGRWGHTL TCVNGSNLVV FGGCGQQGLL NDVFVLNLDA KPPTWREISG LAPPLPRSWH
401: SSCTLDGTKL IVSGGCADSG VLLSDTFLLD LSIEKPVWRE IPAAWTPPSR LGHTLSVYGG RKILMFGGLA KSGPLKFRSS DVFTMDLSEE EPCWRCVTGS
501: GMPGAGNPGG VAPPPRLDHV AVNLPGGRIL IFGGSVAGLH SASQLYLLDP TEDKPTWRIL NIPGRPPRFA WGHGTCVVGG TRAIVLGGQT GEEWMLSELH
601: ELSLASYLT
Arabidopsis Description
ZTLGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KAN2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.