Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G022330.1 | Barley | cytosol | 96.29 | 96.92 |
| TraesCS6B01G149800.1 | Wheat | cytosol | 96.29 | 96.6 |
| TraesCS6D01G111600.1 | Wheat | cytosol | 95.0 | 95.15 |
| Os02t0150800-01 | Rice | cytosol | 84.35 | 83.95 |
| Zm00001d015290_P001 | Maize | cytosol | 81.45 | 82.92 |
| EES04532 | Sorghum | cytosol | 81.61 | 82.68 |
| Zm00001d000306_P001 | Maize | plastid | 14.19 | 81.48 |
| GSMUA_Achr7P15880_001 | Banana | cytosol | 70.16 | 76.18 |
| TraesCS7A01G431600.1 | Wheat | cytosol | 78.39 | 75.58 |
| VIT_04s0008g02490.t01 | Wine grape | nucleus | 73.87 | 74.71 |
| GSMUA_Achr3P05120_001 | Banana | nucleus | 66.13 | 70.33 |
| TraesCS4A01G164000.1 | Wheat | cytosol | 61.29 | 60.7 |
| TraesCS7A01G291800.1 | Wheat | cytosol | 15.81 | 22.07 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:19.2.2.8.1.4.4 | Gene3D:2.120.10.80 | MapMan:26.1.2.3.1 | Gene3D:3.30.450.20 | InterPro:Adagio-like_2 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 |
| GO:GO:0042752 | InterPro:Gal_Oxase/kelch_b-propeller | InterPro:IPR000014 | InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller |
| InterPro:PAS | InterPro:PAS-like_dom_sf | PFAM:PF12937 | PFAM:PF13415 | PFAM:PF13418 | PFAM:PF13426 |
| PFscan:PS50112 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF302 | SUPFAM:SSF50965 | SUPFAM:SSF55785 | SUPFAM:SSF81383 |
| TIGRFAMs:TIGR00229 | EnsemblPlantsGene:TraesCS6A01G121500 | EnsemblPlants:TraesCS6A01G121500.1 | TIGR:cd00130 | SEG:seg | : |
Description
No Description!
Coordinates
chr6A:+:93810320..93814897
Molecular Weight (calculated)
67131.9 Da
IEP (calculated)
5.102
GRAVY (calculated)
-0.160
Length
620 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWDSDSDGS GEEDEEEEEG EEGAGPWGAD GCRGGGGFSL AIEGVLGGAC GLVVSDALEP DFPIIYVNRG FEDATGYHAE EVLGRNCRFL QCRGPFAQRR
101: HPLVDAIVVT EIQRCLEEGT EFQGDLLNFR KDGSPFMTSL QLKPIYGDDE TITHYMGIQF FNDCNVDLGP LPGSMAKEVV RSVWITPDNT LRPSPTGKGN
201: FCSEYSHLFQ LSDEVLCQKI LSRLSPRDIA SVNSVCKRLY HMTKNDHLWR MVCQNAWGND ATRALENVAG TKSLAWGRLA RELTTLEAVT WKKLTIGGSV
301: EPSRCNFSAC AVGNRVVLFG GEGVNAQPMN DTFVLDLSAS KPEWRHVNVG LAPPGRWGHT LSCLNGSLLV LFGGCGGQGL LNDVFILDLD AKHPTWREIF
401: GLTPPVPRSW HSSCTLDGSK LVVSGGCADS GVLLSDTHLL DVTMERPVWR EIPAPWTPPS RLGHSLSVYD GRKILMFGGL AKSGPLRLRS GDVFTMDLSD
501: AAPSWRCITG SGMPGACNPA GVGPPPRLDH VAVSLPGGRI MIFGGSVAGL HSASQLYLLD PTEEKPTWRI LNVPGRPPRF AWGHSTCVME GSKAIVLGGQ
601: TGEEWTLTEI HELSLASSLV
101: HPLVDAIVVT EIQRCLEEGT EFQGDLLNFR KDGSPFMTSL QLKPIYGDDE TITHYMGIQF FNDCNVDLGP LPGSMAKEVV RSVWITPDNT LRPSPTGKGN
201: FCSEYSHLFQ LSDEVLCQKI LSRLSPRDIA SVNSVCKRLY HMTKNDHLWR MVCQNAWGND ATRALENVAG TKSLAWGRLA RELTTLEAVT WKKLTIGGSV
301: EPSRCNFSAC AVGNRVVLFG GEGVNAQPMN DTFVLDLSAS KPEWRHVNVG LAPPGRWGHT LSCLNGSLLV LFGGCGGQGL LNDVFILDLD AKHPTWREIF
401: GLTPPVPRSW HSSCTLDGSK LVVSGGCADS GVLLSDTHLL DVTMERPVWR EIPAPWTPPS RLGHSLSVYD GRKILMFGGL AKSGPLRLRS GDVFTMDLSD
501: AAPSWRCITG SGMPGACNPA GVGPPPRLDH VAVSLPGGRI MIFGGSVAGL HSASQLYLLD PTEEKPTWRI LNVPGRPPRF AWGHSTCVME GSKAIVLGGQ
601: TGEEWTLTEI HELSLASSLV
001: MEWDSGSDLS ADDASSLADD EEGGLFPGGG PIPYPVGNLL HTAPCGFVVT DAVEPDQPII YVNTVFEMVT GYRAEEVLGG NCRFLQCRGP FAKRRHPLVD
101: SMVVSEIRKC IDEGIEFQGE LLNFRKDGSP LMNRLRLTPI YGDDDTITHI IGIQFFIETD IDLGPVLGSS TKEKSIDGIY SALAAGERNV SRGMCGLFQL
201: SDEVVSMKIL SRLTPRDVAS VSSVCRRLYV LTKNEDLWRR VCQNAWGSET TRVLETVPGA KRLGWGRLAR ELTTLEAAAW RKLSVGGSVE PSRCNFSACA
301: VGNRVVLFGG EGVNMQPMND TFVLDLNSDY PEWQHVKVSS PPPGRWGHTL TCVNGSNLVV FGGCGQQGLL NDVFVLNLDA KPPTWREISG LAPPLPRSWH
401: SSCTLDGTKL IVSGGCADSG VLLSDTFLLD LSIEKPVWRE IPAAWTPPSR LGHTLSVYGG RKILMFGGLA KSGPLKFRSS DVFTMDLSEE EPCWRCVTGS
501: GMPGAGNPGG VAPPPRLDHV AVNLPGGRIL IFGGSVAGLH SASQLYLLDP TEDKPTWRIL NIPGRPPRFA WGHGTCVVGG TRAIVLGGQT GEEWMLSELH
601: ELSLASYLT
101: SMVVSEIRKC IDEGIEFQGE LLNFRKDGSP LMNRLRLTPI YGDDDTITHI IGIQFFIETD IDLGPVLGSS TKEKSIDGIY SALAAGERNV SRGMCGLFQL
201: SDEVVSMKIL SRLTPRDVAS VSSVCRRLYV LTKNEDLWRR VCQNAWGSET TRVLETVPGA KRLGWGRLAR ELTTLEAAAW RKLSVGGSVE PSRCNFSACA
301: VGNRVVLFGG EGVNMQPMND TFVLDLNSDY PEWQHVKVSS PPPGRWGHTL TCVNGSNLVV FGGCGQQGLL NDVFVLNLDA KPPTWREISG LAPPLPRSWH
401: SSCTLDGTKL IVSGGCADSG VLLSDTFLLD LSIEKPVWRE IPAAWTPPSR LGHTLSVYGG RKILMFGGLA KSGPLKFRSS DVFTMDLSEE EPCWRCVTGS
501: GMPGAGNPGG VAPPPRLDHV AVNLPGGRIL IFGGSVAGLH SASQLYLLDP TEDKPTWRIL NIPGRPPRFA WGHGTCVVGG TRAIVLGGQT GEEWMLSELH
601: ELSLASYLT
Arabidopsis Description
ZTLGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KAN2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.