Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G022330.1 | Barley | cytosol | 96.28 | 96.59 |
| TraesCS6A01G121500.1 | Wheat | cytosol | 96.6 | 96.29 |
| TraesCS6D01G111600.1 | Wheat | cytosol | 95.31 | 95.15 |
| Os02t0150800-01 | Rice | cytosol | 84.47 | 83.79 |
| Zm00001d015290_P001 | Maize | cytosol | 82.36 | 83.58 |
| EES04532 | Sorghum | cytosol | 82.04 | 82.84 |
| Zm00001d000306_P001 | Maize | plastid | 14.24 | 81.48 |
| GSMUA_Achr7P15880_001 | Banana | cytosol | 70.39 | 76.18 |
| TraesCS6B01G426300.1 | Wheat | cytosol | 78.48 | 75.66 |
| VIT_04s0008g02490.t01 | Wine grape | nucleus | 73.79 | 74.39 |
| GSMUA_Achr3P05120_001 | Banana | nucleus | 66.02 | 69.98 |
| TraesCS4B01G157500.1 | Wheat | cytosol | 60.84 | 60.65 |
| TraesCS7B01G197900.1 | Wheat | cytosol | 15.7 | 21.85 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:19.2.2.8.1.4.4 | Gene3D:2.120.10.80 | MapMan:26.1.2.3.1 | Gene3D:3.30.450.20 | InterPro:Adagio-like_2 |
| InterPro:F-box-like_dom_sf | InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0008150 |
| GO:GO:0042752 | InterPro:Gal_Oxase/kelch_b-propeller | InterPro:IPR000014 | InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller |
| InterPro:PAS | InterPro:PAS-like_dom_sf | PFAM:PF12937 | PFAM:PF13415 | PFAM:PF13418 | PFAM:PF13426 |
| PFscan:PS50112 | PANTHER:PTHR23244 | PANTHER:PTHR23244:SF302 | SUPFAM:SSF50965 | SUPFAM:SSF55785 | SUPFAM:SSF81383 |
| TIGRFAMs:TIGR00229 | EnsemblPlantsGene:TraesCS6B01G149800 | EnsemblPlants:TraesCS6B01G149800.1 | TIGR:cd00130 | SEG:seg | : |
Description
No Description!
Coordinates
chr6B:+:151127202..151131396
Molecular Weight (calculated)
66943.8 Da
IEP (calculated)
5.260
GRAVY (calculated)
-0.141
Length
618 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWDSDSDGS GEEDEEEEEE GVGPWGADGC RGGGGFSLAI EGVLGGACGL VVSDALEPDF PIIYVNRGFE DATGYHAEEV LGRNCRFLQC RGPFAQRRHP
101: LVDAIVVTEI QRCLEEGTGF QGDLLNFRKD GSPFMTSLQL KPIYGDDETI THYMGIQFFN DCNVDLGPLP GSMAKEVVRS IWITPDNTLR PSPTGKGNFC
201: SEYSHLFQLS DEVLCQKILS RLSPRDIASV NSVCKRLYHM TKNDHLWRMV CQNAWGNDAT RALENVAGTK SLAWGRLARE LTTLEAVTWK KLTIGGSVEP
301: SRCNFSACAV GNRVVLFGGE GVNAQPMNDT FVLDLSASKP EWRHVNVGLA PPGRWGHTLS CLNGSLLVLF GGCGGQGLLN DVFILDLDAK HPTWREIFGL
401: TPPVPRSWHS SCTLDGSKLV VSGGCADSGV LLSDTHLLDV TMERPVWREI PAPWTPPSRL GHSLSVYDGR KILMFGGLAK SGPLRLRSGD VFTMDLSDAV
501: PSWRCITGSG MPGACNPAGV GPPPRLDHVA VSLPGGRIMI FGGSVAGLHS ASQLYLLDPT EEKPTWRILN VPGRPPRFAW GHSTCVMEGS KAIVLGGQTG
601: EEWTLTEIHE LSLASSLV
101: LVDAIVVTEI QRCLEEGTGF QGDLLNFRKD GSPFMTSLQL KPIYGDDETI THYMGIQFFN DCNVDLGPLP GSMAKEVVRS IWITPDNTLR PSPTGKGNFC
201: SEYSHLFQLS DEVLCQKILS RLSPRDIASV NSVCKRLYHM TKNDHLWRMV CQNAWGNDAT RALENVAGTK SLAWGRLARE LTTLEAVTWK KLTIGGSVEP
301: SRCNFSACAV GNRVVLFGGE GVNAQPMNDT FVLDLSASKP EWRHVNVGLA PPGRWGHTLS CLNGSLLVLF GGCGGQGLLN DVFILDLDAK HPTWREIFGL
401: TPPVPRSWHS SCTLDGSKLV VSGGCADSGV LLSDTHLLDV TMERPVWREI PAPWTPPSRL GHSLSVYDGR KILMFGGLAK SGPLRLRSGD VFTMDLSDAV
501: PSWRCITGSG MPGACNPAGV GPPPRLDHVA VSLPGGRIMI FGGSVAGLHS ASQLYLLDPT EEKPTWRILN VPGRPPRFAW GHSTCVMEGS KAIVLGGQTG
601: EEWTLTEIHE LSLASSLV
001: MAREHAIGEA TGKRKKRGRV EEAEEYCNDG IEEQVEDEKL PLEVGMFYYP MTPPSFIVSD ALEPDFPLIY VNRVFEVFTG YRADEVLGRN CRFLQYRDPR
101: AQRRHPLVDP VVVSEIRRCL EEGIEFQGEL LNFRKDGTPL VNRLRLAPIR DDDGTITHVI GIQVFSETTI DLDRVSYPVF KHKQQLDQTS ECLFPSGSPR
201: FKEHHEDFCG ILQLSDEVLA HNILSRLTPR DVASIGSACR RLRQLTKNES VRKMVCQNAW GKEITGTLEI MTKKLRWGRL ARELTTLEAV CWRKFTVGGI
301: VQPSRCNFSA CAVGNRLVLF GGEGVNMQPL DDTFVLNLDA ECPEWQRVRV TSSPPGRWGH TLSCLNGSWL VVFGGCGRQG LLNDVFVLDL DAKHPTWKEV
401: AGGTPPLPRS WHSSCTIEGS KLVVSGGCTD AGVLLSDTFL LDLTTDKPTW KEIPTSWAPP SRLGHSLSVF GRTKILMFGG LANSGHLKLR SGEAYTIDLE
501: DEEPRWRELE CSAFPGVVVP PPRLDHVAVS MPCGRVIIFG GSIAGLHSPS QLFLIDPAEE KPSWRILNVP GKPPKLAWGH STCVVGGTRV LVLGGHTGEE
601: WILNELHELC LASRQDSDL
101: AQRRHPLVDP VVVSEIRRCL EEGIEFQGEL LNFRKDGTPL VNRLRLAPIR DDDGTITHVI GIQVFSETTI DLDRVSYPVF KHKQQLDQTS ECLFPSGSPR
201: FKEHHEDFCG ILQLSDEVLA HNILSRLTPR DVASIGSACR RLRQLTKNES VRKMVCQNAW GKEITGTLEI MTKKLRWGRL ARELTTLEAV CWRKFTVGGI
301: VQPSRCNFSA CAVGNRLVLF GGEGVNMQPL DDTFVLNLDA ECPEWQRVRV TSSPPGRWGH TLSCLNGSWL VVFGGCGRQG LLNDVFVLDL DAKHPTWKEV
401: AGGTPPLPRS WHSSCTIEGS KLVVSGGCTD AGVLLSDTFL LDLTTDKPTW KEIPTSWAPP SRLGHSLSVF GRTKILMFGG LANSGHLKLR SGEAYTIDLE
501: DEEPRWRELE CSAFPGVVVP PPRLDHVAVS MPCGRVIIFG GSIAGLHSPS QLFLIDPAEE KPSWRILNVP GKPPKLAWGH STCVVGGTRV LVLGGHTGEE
601: WILNELHELC LASRQDSDL
Arabidopsis Description
ADO3FKF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.