Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G431600.1 | Wheat | cytosol | 97.82 | 97.51 |
| TraesCS7D01G423400.1 | Wheat | cytosol | 94.7 | 94.84 |
| HORVU7Hr1G099010.1 | Barley | cytosol | 96.1 | 94.77 |
| Os06t0694000-01 | Rice | cytosol | 88.46 | 90.0 |
| EER90290 | Sorghum | cytosol | 87.52 | 88.91 |
| Zm00001d014594_P001 | Maize | cytosol | 87.52 | 88.21 |
| Zm00001d036524_P001 | Maize | cytosol | 86.43 | 87.94 |
| GSMUA_Achr7P15880_001 | Banana | cytosol | 71.61 | 80.39 |
| VIT_04s0008g02490.t01 | Wine grape | nucleus | 75.19 | 78.63 |
| TraesCS6B01G149800.1 | Wheat | cytosol | 75.66 | 78.48 |
| GSMUA_Achr3P05120_001 | Banana | nucleus | 67.39 | 74.1 |
| TraesCS4B01G157500.1 | Wheat | cytosol | 58.66 | 60.65 |
| TraesCS7B01G197900.1 | Wheat | cytosol | 15.76 | 22.75 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:19.2.2.8.1.4.4 | Gene3D:2.120.10.80 | MapMan:26.1.2.3.1 | Gene3D:3.30.450.20 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000014 | InterPro:IPR001810 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_2 | InterPro:PAS | InterPro:PAS-like_dom_sf | PFAM:PF07646 |
| PFAM:PF12937 | PFAM:PF13415 | PFAM:PF13418 | PFAM:PF13426 | PFscan:PS50112 | PFscan:PS50181 |
| PANTHER:PTHR23244 | PANTHER:PTHR23244:SF348 | SMART:SM00256 | SUPFAM:SSF117281 | SUPFAM:SSF55785 | SUPFAM:SSF81383 |
| TIGRFAMs:TIGR00229 | EnsemblPlantsGene:TraesCS6B01G426300 | EnsemblPlants:TraesCS6B01G426300.1 | TIGR:cd00130 | SEG:seg | : |
Description
No Description!
Coordinates
chr6B:+:694674413..694679315
Molecular Weight (calculated)
69116.1 Da
IEP (calculated)
5.112
GRAVY (calculated)
-0.179
Length
641 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWDSESDGG GSAGSGDEME EEEGGEMVVG GAGGSGSGSE GGGGIGGDGV GGMFTFAIEG MLRGAGPYGL VVTDALEPDC PIIYVNRGFE EATGYRAEEV
101: LGRNCRFLQC RGPFAQRRHP LVDDAVVSGI QRCIDNGTQF RGDLLNFRKD GFPLMNRLHL TPIYGDDDII THYMGIQFFT NANVDLGPVP GSVTREPVRS
201: TRFAPDNFFR PITTGLEQDN FCREYSSLFQ LTDEVLCQSI LSRLSPRDVA SVSSVCRRLY DLTKNEDLWR MVCRNAWGSE TTRALETVPA AKRLGWGRLA
301: RELTTLEAVA WRKLTVGGAV EPSRCNFSAC AVGNRVVLFG GEGVNMQPMN DTFVLDLNAS NPEWRHVNVS SAPPGRWGHT LSCLNGSWLV VFGGCGRQGL
401: LNDVFMLDLD AKHPTWREIP GVAPPVPRSW HSSCTLDGNK LVVSGGCADS GVLLSDTFLL DVSMDRPVWR EVPASWTPPS RLGHSMSVYD GRKILMFGGL
501: AKSGPLRLRS SDVFTMDLSE EEPCWRCLTG SGMPGAGNPA GAGPPPRLDH VAVSLPGGRV LIFGGSVAGL HSASQLYLLD PTEEKPTWRI LNVPGRPPRF
601: AWGHSTCVVG GTKAIVLGGQ TGEEWMLTEV HELSLASSNS V
101: LGRNCRFLQC RGPFAQRRHP LVDDAVVSGI QRCIDNGTQF RGDLLNFRKD GFPLMNRLHL TPIYGDDDII THYMGIQFFT NANVDLGPVP GSVTREPVRS
201: TRFAPDNFFR PITTGLEQDN FCREYSSLFQ LTDEVLCQSI LSRLSPRDVA SVSSVCRRLY DLTKNEDLWR MVCRNAWGSE TTRALETVPA AKRLGWGRLA
301: RELTTLEAVA WRKLTVGGAV EPSRCNFSAC AVGNRVVLFG GEGVNMQPMN DTFVLDLNAS NPEWRHVNVS SAPPGRWGHT LSCLNGSWLV VFGGCGRQGL
401: LNDVFMLDLD AKHPTWREIP GVAPPVPRSW HSSCTLDGNK LVVSGGCADS GVLLSDTFLL DVSMDRPVWR EVPASWTPPS RLGHSMSVYD GRKILMFGGL
501: AKSGPLRLRS SDVFTMDLSE EEPCWRCLTG SGMPGAGNPA GAGPPPRLDH VAVSLPGGRV LIFGGSVAGL HSASQLYLLD PTEEKPTWRI LNVPGRPPRF
601: AWGHSTCVVG GTKAIVLGGQ TGEEWMLTEV HELSLASSNS V
001: MEWDSGSDLS ADDASSLADD EEGGLFPGGG PIPYPVGNLL HTAPCGFVVT DAVEPDQPII YVNTVFEMVT GYRAEEVLGG NCRFLQCRGP FAKRRHPLVD
101: SMVVSEIRKC IDEGIEFQGE LLNFRKDGSP LMNRLRLTPI YGDDDTITHI IGIQFFIETD IDLGPVLGSS TKEKSIDGIY SALAAGERNV SRGMCGLFQL
201: SDEVVSMKIL SRLTPRDVAS VSSVCRRLYV LTKNEDLWRR VCQNAWGSET TRVLETVPGA KRLGWGRLAR ELTTLEAAAW RKLSVGGSVE PSRCNFSACA
301: VGNRVVLFGG EGVNMQPMND TFVLDLNSDY PEWQHVKVSS PPPGRWGHTL TCVNGSNLVV FGGCGQQGLL NDVFVLNLDA KPPTWREISG LAPPLPRSWH
401: SSCTLDGTKL IVSGGCADSG VLLSDTFLLD LSIEKPVWRE IPAAWTPPSR LGHTLSVYGG RKILMFGGLA KSGPLKFRSS DVFTMDLSEE EPCWRCVTGS
501: GMPGAGNPGG VAPPPRLDHV AVNLPGGRIL IFGGSVAGLH SASQLYLLDP TEDKPTWRIL NIPGRPPRFA WGHGTCVVGG TRAIVLGGQT GEEWMLSELH
601: ELSLASYLT
101: SMVVSEIRKC IDEGIEFQGE LLNFRKDGSP LMNRLRLTPI YGDDDTITHI IGIQFFIETD IDLGPVLGSS TKEKSIDGIY SALAAGERNV SRGMCGLFQL
201: SDEVVSMKIL SRLTPRDVAS VSSVCRRLYV LTKNEDLWRR VCQNAWGSET TRVLETVPGA KRLGWGRLAR ELTTLEAAAW RKLSVGGSVE PSRCNFSACA
301: VGNRVVLFGG EGVNMQPMND TFVLDLNSDY PEWQHVKVSS PPPGRWGHTL TCVNGSNLVV FGGCGQQGLL NDVFVLNLDA KPPTWREISG LAPPLPRSWH
401: SSCTLDGTKL IVSGGCADSG VLLSDTFLLD LSIEKPVWRE IPAAWTPPSR LGHTLSVYGG RKILMFGGLA KSGPLKFRSS DVFTMDLSEE EPCWRCVTGS
501: GMPGAGNPGG VAPPPRLDHV AVNLPGGRIL IFGGSVAGLH SASQLYLLDP TEDKPTWRIL NIPGRPPRFA WGHGTCVVGG TRAIVLGGQT GEEWMLSELH
601: ELSLASYLT
Arabidopsis Description
ZTLGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KAN2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.