Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G426300.1 | Wheat | cytosol | 97.51 | 97.82 |
| TraesCS7D01G423400.1 | Wheat | cytosol | 95.02 | 95.47 |
| HORVU7Hr1G099010.1 | Barley | cytosol | 96.27 | 95.23 |
| Os06t0694000-01 | Rice | cytosol | 88.18 | 90.0 |
| EER90290 | Sorghum | cytosol | 87.4 | 89.06 |
| Zm00001d014594_P001 | Maize | cytosol | 87.4 | 88.36 |
| Zm00001d036524_P001 | Maize | cytosol | 86.47 | 88.25 |
| GSMUA_Achr7P15880_001 | Banana | cytosol | 71.54 | 80.56 |
| VIT_04s0008g02490.t01 | Wine grape | nucleus | 74.96 | 78.63 |
| TraesCS6A01G121500.1 | Wheat | cytosol | 75.58 | 78.39 |
| GSMUA_Achr3P05120_001 | Banana | nucleus | 67.65 | 74.61 |
| TraesCS4A01G164000.1 | Wheat | cytosol | 60.19 | 61.82 |
| TraesCS7A01G291800.1 | Wheat | cytosol | 15.86 | 22.97 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:19.2.2.8.1.4.4 | Gene3D:2.120.10.80 | MapMan:26.1.2.3.1 | Gene3D:3.30.450.20 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000014 | InterPro:IPR001810 |
| InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:Kelch_2 | InterPro:PAS | InterPro:PAS-like_dom_sf | PFAM:PF07646 |
| PFAM:PF12937 | PFAM:PF13415 | PFAM:PF13418 | PFAM:PF13426 | PFscan:PS50112 | PFscan:PS50181 |
| PANTHER:PTHR23244 | PANTHER:PTHR23244:SF348 | SMART:SM00256 | SUPFAM:SSF117281 | SUPFAM:SSF55785 | SUPFAM:SSF81383 |
| TIGRFAMs:TIGR00229 | EnsemblPlantsGene:TraesCS7A01G431600 | EnsemblPlants:TraesCS7A01G431600.1 | TIGR:cd00130 | SEG:seg | : |
Description
No Description!
Coordinates
chr7A:+:625635655..625640991
Molecular Weight (calculated)
69418.3 Da
IEP (calculated)
4.987
GRAVY (calculated)
-0.185
Length
643 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWDSESDGG GSAGSGDEME EEEEEGGEVV LGGGSGSGSE GGGFGGIGGD GVGGMFTFAI EGMLRGAGPY GLVVTDALEP DCPIIYVNRG FEEATGYRAE
101: EVLGRNCRFL QCRGPFAQRR HPLVDDAVVS GIQRCVDNGT QFRGDLLNFR KDGFPLMNRL HLTPIYGDDD IITHYMGIQF FTNANVDLGP VPGSVTREPV
201: RSTRFAPDNF FRPITTGLEQ DNFCREYSSL FQLTDEVLCQ SILSRLSPRD VASVSSVCRR LYDLTKNEDL WRMVCRNAWG SETTRALETV PAAKRLGWGR
301: LARELTTLEA VAWRKLTVGG AVEPSRCNFS ACAVGNRVVL FGGEGVNMQP MNDTFVLDLN ASNPEWRHVN VSSAPPGRWG HTLSCLNGSW LVVFGGCGRQ
401: GLLNDVFMLD LDAKHPTWRE IPGVAPPVPR SWHSSCTLDG NKLVVSGGCA DSGVLLSDTF LLDVSMDRPV WREVPASWTP PSRLGHSMSV YDGRKILMFG
501: GLAKSGPLRL RSSDVFTMDL SEEEPCWRCL TGSGMPGAGN PAGAGPPPRL DHVAVSLPGG RVLIFGGSVA GLHSASQLYL LDPTEEKPTW RILNVPGRPP
601: RFAWGHSTCV VGGTKAIVLG GQTGEEWMLT EVHELSLASS NSV
101: EVLGRNCRFL QCRGPFAQRR HPLVDDAVVS GIQRCVDNGT QFRGDLLNFR KDGFPLMNRL HLTPIYGDDD IITHYMGIQF FTNANVDLGP VPGSVTREPV
201: RSTRFAPDNF FRPITTGLEQ DNFCREYSSL FQLTDEVLCQ SILSRLSPRD VASVSSVCRR LYDLTKNEDL WRMVCRNAWG SETTRALETV PAAKRLGWGR
301: LARELTTLEA VAWRKLTVGG AVEPSRCNFS ACAVGNRVVL FGGEGVNMQP MNDTFVLDLN ASNPEWRHVN VSSAPPGRWG HTLSCLNGSW LVVFGGCGRQ
401: GLLNDVFMLD LDAKHPTWRE IPGVAPPVPR SWHSSCTLDG NKLVVSGGCA DSGVLLSDTF LLDVSMDRPV WREVPASWTP PSRLGHSMSV YDGRKILMFG
501: GLAKSGPLRL RSSDVFTMDL SEEEPCWRCL TGSGMPGAGN PAGAGPPPRL DHVAVSLPGG RVLIFGGSVA GLHSASQLYL LDPTEEKPTW RILNVPGRPP
601: RFAWGHSTCV VGGTKAIVLG GQTGEEWMLT EVHELSLASS NSV
001: MEWDSGSDLS ADDASSLADD EEGGLFPGGG PIPYPVGNLL HTAPCGFVVT DAVEPDQPII YVNTVFEMVT GYRAEEVLGG NCRFLQCRGP FAKRRHPLVD
101: SMVVSEIRKC IDEGIEFQGE LLNFRKDGSP LMNRLRLTPI YGDDDTITHI IGIQFFIETD IDLGPVLGSS TKEKSIDGIY SALAAGERNV SRGMCGLFQL
201: SDEVVSMKIL SRLTPRDVAS VSSVCRRLYV LTKNEDLWRR VCQNAWGSET TRVLETVPGA KRLGWGRLAR ELTTLEAAAW RKLSVGGSVE PSRCNFSACA
301: VGNRVVLFGG EGVNMQPMND TFVLDLNSDY PEWQHVKVSS PPPGRWGHTL TCVNGSNLVV FGGCGQQGLL NDVFVLNLDA KPPTWREISG LAPPLPRSWH
401: SSCTLDGTKL IVSGGCADSG VLLSDTFLLD LSIEKPVWRE IPAAWTPPSR LGHTLSVYGG RKILMFGGLA KSGPLKFRSS DVFTMDLSEE EPCWRCVTGS
501: GMPGAGNPGG VAPPPRLDHV AVNLPGGRIL IFGGSVAGLH SASQLYLLDP TEDKPTWRIL NIPGRPPRFA WGHGTCVVGG TRAIVLGGQT GEEWMLSELH
601: ELSLASYLT
101: SMVVSEIRKC IDEGIEFQGE LLNFRKDGSP LMNRLRLTPI YGDDDTITHI IGIQFFIETD IDLGPVLGSS TKEKSIDGIY SALAAGERNV SRGMCGLFQL
201: SDEVVSMKIL SRLTPRDVAS VSSVCRRLYV LTKNEDLWRR VCQNAWGSET TRVLETVPGA KRLGWGRLAR ELTTLEAAAW RKLSVGGSVE PSRCNFSACA
301: VGNRVVLFGG EGVNMQPMND TFVLDLNSDY PEWQHVKVSS PPPGRWGHTL TCVNGSNLVV FGGCGQQGLL NDVFVLNLDA KPPTWREISG LAPPLPRSWH
401: SSCTLDGTKL IVSGGCADSG VLLSDTFLLD LSIEKPVWRE IPAAWTPPSR LGHTLSVYGG RKILMFGGLA KSGPLKFRSS DVFTMDLSEE EPCWRCVTGS
501: GMPGAGNPGG VAPPPRLDHV AVNLPGGRIL IFGGSVAGLH SASQLYLLDP TEDKPTWRIL NIPGRPPRFA WGHGTCVVGG TRAIVLGGQT GEEWMLSELH
601: ELSLASYLT
Arabidopsis Description
ZTLGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KAN2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.