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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 3
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d036524_P001 Maize cytosol 93.82 93.97
Zm00001d014594_P001 Maize cytosol 94.14 93.4
Os06t0694000-01 Rice cytosol 92.87 93.02
TraesCS7D01G423400.1 Wheat cytosol 88.91 87.66
TraesCS6B01G426300.1 Wheat cytosol 88.91 87.52
TraesCS7A01G431600.1 Wheat cytosol 89.06 87.4
HORVU7Hr1G099010.1 Barley cytosol 89.54 86.92
GSMUA_Achr7P15880_001 Banana cytosol 73.22 80.91
EES04532 Sorghum cytosol 78.45 80.88
VIT_04s0008g02490.t01 Wine grape nucleus 76.07 78.3
GSMUA_Achr3P05120_001 Banana nucleus 71.0 76.84
OQU83614 Sorghum cytosol 61.33 65.15
OQU80127 Sorghum cytosol, nucleus, peroxisome 17.27 21.12
Protein Annotations
Gene3D:1.20.1280.50MapMan:19.2.2.8.1.4.4Gene3D:2.120.10.80MapMan:26.1.2.3.1Gene3D:3.30.450.20EntrezGene:8065120
UniProt:C5Z8R1EnsemblPlants:EER90290ProteinID:EER90290ProteinID:EER90290.1InterPro:F-box-like_dom_sfInterPro:F-box_dom
GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0008150GO:GO:0042752InterPro:Gal_Oxase/kelch_b-propeller
InterPro:IPR000014InterPro:IPR001810InterPro:IPR015915InterPro:Kelch-typ_b-propellerInterPro:Kelch_2InterPro:PAS
InterPro:PAS-like_dom_sfPFAM:PF07646PFAM:PF12937PFAM:PF13415PFAM:PF13418PFAM:PF13426
PFscan:PS50112PFscan:PS50181PANTHER:PTHR23244PANTHER:PTHR23244:SF348SMART:SM00256EnsemblPlantsGene:SORBI_3010G243900
SUPFAM:SSF50965SUPFAM:SSF55785SUPFAM:SSF81383unigene:Sbi.10966TIGRFAMs:TIGR00229UniParc:UPI0001A89720
RefSeq:XP_002438923.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr10:-:58474320..58480965
Molecular Weight (calculated)
68783.7 Da
IEP (calculated)
5.414
GRAVY (calculated)
-0.244
Length
631 amino acids
Sequence
(BLAST)
001: MEWDSESDGA GSVGAGEEEQ EQEEEEEERR SEGGGGDAGG AGGMFTFAIE GMLRASGPCG LVVTDALEPD CPIIYVNRGF EEATGYRAEE VLGRNCRFLQ
101: CRGPFARRRH PLVDAAVVSE IRRCIDNGIE FRGDLLNFRK DGTPLMNRLH LTPIYGDDET ITHYMGIQFF TDANVDLGPL PCSMTKEPVR STRFAPDNSF
201: RPISTGPEHS NFCREYSSLF QLTDEVLCQS ILSRLSPRDI ASVSSVCRRL YHLTRNEDLW RMVCQNAWGS ETTRALETVP AARRLGWGRL ARELTTLEAV
301: AWRKLTVGGA VEPSRCNFSA CAVGNRVVLF GGEGVNMQPM NDTFVLDLNA SNPEWRHINV SAAPPGRWGH TLSCLNGSWL VVFGGCGRQG LLNDVFMLDL
401: DAKQPTWREI PGVAPPVPRS WHSSCTLDGT KLVVSGGCAD SGVLLSDTYL LDVTMDRPVW REVPASWKPP SRLGHSMSVY GGRKILMFGG LAKSGPLRLR
501: SSDVYTMDLS EEEPCWRCLT GSGMPGAGNP AGAGPPPRLD HVAVSLPGGR ILIFGGSVAG LHSASQLYLL DPTEDKPTWR ILNVPGRPPR FAWGHSTCVV
601: GGTKAIVLGG QTGEEWMLTE IHELSLASNS V
Best Arabidopsis Sequence Match ( AT5G57360.1 )
(BLAST)
001: MEWDSGSDLS ADDASSLADD EEGGLFPGGG PIPYPVGNLL HTAPCGFVVT DAVEPDQPII YVNTVFEMVT GYRAEEVLGG NCRFLQCRGP FAKRRHPLVD
101: SMVVSEIRKC IDEGIEFQGE LLNFRKDGSP LMNRLRLTPI YGDDDTITHI IGIQFFIETD IDLGPVLGSS TKEKSIDGIY SALAAGERNV SRGMCGLFQL
201: SDEVVSMKIL SRLTPRDVAS VSSVCRRLYV LTKNEDLWRR VCQNAWGSET TRVLETVPGA KRLGWGRLAR ELTTLEAAAW RKLSVGGSVE PSRCNFSACA
301: VGNRVVLFGG EGVNMQPMND TFVLDLNSDY PEWQHVKVSS PPPGRWGHTL TCVNGSNLVV FGGCGQQGLL NDVFVLNLDA KPPTWREISG LAPPLPRSWH
401: SSCTLDGTKL IVSGGCADSG VLLSDTFLLD LSIEKPVWRE IPAAWTPPSR LGHTLSVYGG RKILMFGGLA KSGPLKFRSS DVFTMDLSEE EPCWRCVTGS
501: GMPGAGNPGG VAPPPRLDHV AVNLPGGRIL IFGGSVAGLH SASQLYLLDP TEDKPTWRIL NIPGRPPRFA WGHGTCVVGG TRAIVLGGQT GEEWMLSELH
601: ELSLASYLT
Arabidopsis Description
ZTLGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KAN2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.