CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015290_P001	Maize	cytosol	95.1	95.57
Zm00001d000306_P001	Maize	plastid	15.52	87.96
Os02t0150800-01	Rice	cytosol	86.11	84.59
TraesCS6B01G149800.1	Wheat	cytosol	82.84	82.04
HORVU6Hr1G022330.1	Barley	cytosol	82.52	81.98
TraesCS6A01G121500.1	Wheat	cytosol	82.68	81.61
TraesCS6D01G111600.1	Wheat	cytosol	82.52	81.58
GSMUA_Achr7P15880_001	Banana	cytosol	73.53	78.81
EER90290	Sorghum	cytosol	80.88	78.45
VIT_04s0008g02490.t01	Wine grape	nucleus	75.33	75.2
GSMUA_Achr3P05120_001	Banana	nucleus	67.32	70.67
OQU83614	Sorghum	cytosol	62.25	64.14
OQU80127	Sorghum	cytosol, nucleus, peroxisome	17.48	20.74

Protein Annotations

Gene3D:1.20.1280.50	MapMan:19.2.2.8.1.4.4	Gene3D:2.120.10.80	MapMan:26.1.2.3.1	Gene3D:3.30.450.20	EntrezGene:8074643
InterPro:Adagio-like_2	UniProt:C5XUQ2	EnsemblPlants:EES04532	ProteinID:EES04532	ProteinID:EES04532.1	InterPro:F-box-like_dom_sf
InterPro:F-box_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0008150	GO:GO:0042752
InterPro:IPR000014	InterPro:IPR001810	InterPro:IPR015915	ProteinID:KXG29478.1	InterPro:Kelch-typ_b-propeller	InterPro:PAS
InterPro:PAS-like_dom_sf	PFAM:PF12937	PFAM:PF13415	PFAM:PF13418	PFAM:PF13426	PFscan:PS50112
PANTHER:PTHR23244	PANTHER:PTHR23244:SF302	EnsemblPlantsGene:SORBI_3004G042200	SUPFAM:SSF117281	SUPFAM:SSF55785	SUPFAM:SSF81383
unigene:Sbi.8233	TIGRFAMs:TIGR00229	UniParc:UPI0001A854DE	RefSeq:XP_002451556.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:+:3463138..3467948

Molecular Weight (calculated)

66171.8 Da

IEP (calculated)

5.383

GRAVY (calculated)

-0.156

Length

612 amino acids

Sequence
(BLAST)

001: MEWDSDSDGG GDDEEEEEVR PGGGGGDAGP GFSLAIEGVL GACGMVVSDA LEPDFPIIYV NRGFEEATGY RAEEVLGRNC RFLQCRGPFA QRRHPLVDAA
101: VVTGIRRCLE EGTEFQGDLL NFRKDGSPYM ARLQLTPIYG DDEMITHYMG IQFFNDSNVD LGPSPGSVTK ELARSTWIAP GNTDSPTSVG KGNLWEHSSL
201: FLLSDEVICQ KILSKLSPRD IASVNSVCKR FYHMTRNEDL WRMVCQNAWG TEATRALETV AGSRSLAWGR LARELTTLEA VAWRKLTVGG AVEPSRCNFS
301: ACAVGNRVVL FGGEGVNMQP MNDTFVLDLS ASKPEWRHIN VSSAPPGRWG HTLSCLNGSR LILFGGCGGQ GLLNDVFILD LDAQHPTWRE IPGLAPPVPR
401: SWHSSCTVDG TKLVVSGGCA DSGVLLSDTY LLDVTMEKPV WREIPASWSP PSRLGHSLSV YDGKKILMFG GLAKSGPLRL RSSDVFTLDL SEDKPCWRCI
501: TGSRMPGAGN PAGVGPPPRL DHVAVSLPGG RVLIFGGSVA GLHSASKLYL LDPTEEKPTW RLLNVPGHPP RFAWGHSTCV VGGTKAIVLG GQTGEEWMLT
601: EIYELSLASS LI

Best Arabidopsis Sequence Match ( AT5G57360.1 )
(BLAST)

001: MEWDSGSDLS ADDASSLADD EEGGLFPGGG PIPYPVGNLL HTAPCGFVVT DAVEPDQPII YVNTVFEMVT GYRAEEVLGG NCRFLQCRGP FAKRRHPLVD
101: SMVVSEIRKC IDEGIEFQGE LLNFRKDGSP LMNRLRLTPI YGDDDTITHI IGIQFFIETD IDLGPVLGSS TKEKSIDGIY SALAAGERNV SRGMCGLFQL
201: SDEVVSMKIL SRLTPRDVAS VSSVCRRLYV LTKNEDLWRR VCQNAWGSET TRVLETVPGA KRLGWGRLAR ELTTLEAAAW RKLSVGGSVE PSRCNFSACA
301: VGNRVVLFGG EGVNMQPMND TFVLDLNSDY PEWQHVKVSS PPPGRWGHTL TCVNGSNLVV FGGCGQQGLL NDVFVLNLDA KPPTWREISG LAPPLPRSWH
401: SSCTLDGTKL IVSGGCADSG VLLSDTFLLD LSIEKPVWRE IPAAWTPPSR LGHTLSVYGG RKILMFGGLA KSGPLKFRSS DVFTMDLSEE EPCWRCVTGS
501: GMPGAGNPGG VAPPPRLDHV AVNLPGGRIL IFGGSVAGLH SASQLYLLDP TEDKPTWRIL NIPGRPPRFA WGHGTCVVGG TRAIVLGGQT GEEWMLSELH
601: ELSLASYLT

Arabidopsis Description

ZTLGalactose oxidase/kelch repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KAN2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.