Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G157500.1 | Wheat | cytosol | 96.17 | 97.1 |
| OQU83614 | Sorghum | cytosol | 80.03 | 84.34 |
| Zm00001d007445_P001 | Maize | cytosol | 79.55 | 81.77 |
| Os11t0547000-01 | Rice | cytosol | 81.47 | 80.95 |
| Zm00001d053091_P001 | Maize | cytosol | 79.87 | 80.91 |
| GSMUA_Achr7P11200_001 | Banana | cytosol | 64.54 | 70.63 |
| KRH60424 | Soybean | cytosol | 67.89 | 68.55 |
| VIT_01s0011g05810.t01 | Wine grape | cytosol | 66.29 | 67.37 |
| AT1G68050.1 | Thale cress | cytosol | 66.13 | 66.88 |
| KRH41723 | Soybean | cytosol, extracellular, nucleus | 67.57 | 65.38 |
| PGSC0003DMT400051416 | Potato | cytosol | 65.97 | 65.14 |
| TraesCS6A01G121500.1 | Wheat | cytosol | 60.7 | 61.29 |
| Solyc01g005300.2.1 | Tomato | cytosol | 59.27 | 61.12 |
| TraesCS7A01G431600.1 | Wheat | cytosol | 61.82 | 60.19 |
| TraesCS7A01G291800.1 | Wheat | cytosol | 14.86 | 20.95 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:19.2.2.8.1.4.4 | Gene3D:2.120.10.80 | MapMan:26.1.2.3.1 | Gene3D:3.30.450.20 | InterPro:F-box-like_dom_sf |
| InterPro:F-box_dom | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0007275 | GO:GO:0007623 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009628 | GO:GO:0009637 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009911 | GO:GO:0009987 |
| GO:GO:0010468 | InterPro:IPR000014 | InterPro:IPR001810 | InterPro:IPR015915 | InterPro:Kelch-typ_b-propeller | InterPro:PAS |
| InterPro:PAS-like_dom_sf | PFAM:PF00646 | PFAM:PF13415 | PFAM:PF13418 | PFAM:PF13426 | PFscan:PS50112 |
| PANTHER:PTHR23244 | PANTHER:PTHR23244:SF263 | SUPFAM:SSF117281 | SUPFAM:SSF55785 | SUPFAM:SSF81383 | EnsemblPlantsGene:TraesCS4A01G164000 |
| EnsemblPlants:TraesCS4A01G164000.1 | TIGR:cd00130 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4A:-:375730554..375733296
Molecular Weight (calculated)
68841.3 Da
IEP (calculated)
5.958
GRAVY (calculated)
-0.173
Length
626 amino acids
Sequence
(BLAST)
(BLAST)
001: MFDGVDRCAV VAVKRMRLCA MEEEVEEGME VDGEEEEEEG TGGWAWGAPG LGMAGQPGEQ MAAAIVVADA VEPDFPVIYV NAAFEAATGY RAHEVLGRNC
101: RFLQFRDPLA QRRHPLVDPM VVSEMRRCLS DGIEFQGELL NFRKNGAPLN NRLRLIPMHG DDGAFTHIIA IQLFSDANID PSNISYPVYK PQSSHRLSFQ
201: DMNRTSHEHT PIVQCSEYCA IFNLSDEVLA YNILSRLSPR DVASVGSVCT RMHLLTKNDH LTKMVCQNAW GRDVTGRLEM STKMLGWGRL ARELTTLKAA
301: SWKKFTVGGR VEPSRCNFSA CAVGNRLVLF GGEGVNMQPM SDTFVLNLEA PKPEWCRVKV SASPPGRWGH TLSWLNGSWL VVFGGCGQQG LLNDVFVLDL
401: DAQTPAWREI ASDGPPLPRS WHSSCTLDGS KLVVSGGCAE SGVLLSDTFL LDLTKEKPTW KEIPTSWSSR LGHTFSVYGK TKIFMFGGLA KSGSLRLRSS
501: DAYIMDFGEE NPQWRQLATT GFPSVGPPPR LDHVTVSLPC GRIIIFGGSI AGLHSPAELF LLDPAEEKPT WRILNVPGQP PKFAWGHSTC VVGGTRILVL
601: GGHTGEEWIL NELHELCLSS RPDEDG
101: RFLQFRDPLA QRRHPLVDPM VVSEMRRCLS DGIEFQGELL NFRKNGAPLN NRLRLIPMHG DDGAFTHIIA IQLFSDANID PSNISYPVYK PQSSHRLSFQ
201: DMNRTSHEHT PIVQCSEYCA IFNLSDEVLA YNILSRLSPR DVASVGSVCT RMHLLTKNDH LTKMVCQNAW GRDVTGRLEM STKMLGWGRL ARELTTLKAA
301: SWKKFTVGGR VEPSRCNFSA CAVGNRLVLF GGEGVNMQPM SDTFVLNLEA PKPEWCRVKV SASPPGRWGH TLSWLNGSWL VVFGGCGQQG LLNDVFVLDL
401: DAQTPAWREI ASDGPPLPRS WHSSCTLDGS KLVVSGGCAE SGVLLSDTFL LDLTKEKPTW KEIPTSWSSR LGHTFSVYGK TKIFMFGGLA KSGSLRLRSS
501: DAYIMDFGEE NPQWRQLATT GFPSVGPPPR LDHVTVSLPC GRIIIFGGSI AGLHSPAELF LLDPAEEKPT WRILNVPGQP PKFAWGHSTC VVGGTRILVL
601: GGHTGEEWIL NELHELCLSS RPDEDG
001: MAREHAIGEA TGKRKKRGRV EEAEEYCNDG IEEQVEDEKL PLEVGMFYYP MTPPSFIVSD ALEPDFPLIY VNRVFEVFTG YRADEVLGRN CRFLQYRDPR
101: AQRRHPLVDP VVVSEIRRCL EEGIEFQGEL LNFRKDGTPL VNRLRLAPIR DDDGTITHVI GIQVFSETTI DLDRVSYPVF KHKQQLDQTS ECLFPSGSPR
201: FKEHHEDFCG ILQLSDEVLA HNILSRLTPR DVASIGSACR RLRQLTKNES VRKMVCQNAW GKEITGTLEI MTKKLRWGRL ARELTTLEAV CWRKFTVGGI
301: VQPSRCNFSA CAVGNRLVLF GGEGVNMQPL DDTFVLNLDA ECPEWQRVRV TSSPPGRWGH TLSCLNGSWL VVFGGCGRQG LLNDVFVLDL DAKHPTWKEV
401: AGGTPPLPRS WHSSCTIEGS KLVVSGGCTD AGVLLSDTFL LDLTTDKPTW KEIPTSWAPP SRLGHSLSVF GRTKILMFGG LANSGHLKLR SGEAYTIDLE
501: DEEPRWRELE CSAFPGVVVP PPRLDHVAVS MPCGRVIIFG GSIAGLHSPS QLFLIDPAEE KPSWRILNVP GKPPKLAWGH STCVVGGTRV LVLGGHTGEE
601: WILNELHELC LASRQDSDL
101: AQRRHPLVDP VVVSEIRRCL EEGIEFQGEL LNFRKDGTPL VNRLRLAPIR DDDGTITHVI GIQVFSETTI DLDRVSYPVF KHKQQLDQTS ECLFPSGSPR
201: FKEHHEDFCG ILQLSDEVLA HNILSRLTPR DVASIGSACR RLRQLTKNES VRKMVCQNAW GKEITGTLEI MTKKLRWGRL ARELTTLEAV CWRKFTVGGI
301: VQPSRCNFSA CAVGNRLVLF GGEGVNMQPL DDTFVLNLDA ECPEWQRVRV TSSPPGRWGH TLSCLNGSWL VVFGGCGRQG LLNDVFVLDL DAKHPTWKEV
401: AGGTPPLPRS WHSSCTIEGS KLVVSGGCTD AGVLLSDTFL LDLTTDKPTW KEIPTSWAPP SRLGHSLSVF GRTKILMFGG LANSGHLKLR SGEAYTIDLE
501: DEEPRWRELE CSAFPGVVVP PPRLDHVAVS MPCGRVIIFG GSIAGLHSPS QLFLIDPAEE KPSWRILNVP GKPPKLAWGH STCVVGGTRV LVLGGHTGEE
601: WILNELHELC LASRQDSDL
Arabidopsis Description
ADO3FKF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W8F6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.