Factsheet for TraesCS2D01G302500.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G279100.1
TraesCS1B01G288100.1
TraesCS1D01G278400.1
TraesCS3A01G367500.1
TraesCS3B01G399200.1
TraesCS3D01G360400.2
TraesCS4A01G091200.1
TraesCS4A01G164000.1
TraesCS4B01G157500.1
TraesCS4B01G213500.1
TraesCS4D01G214200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G08590.1	TraesCS4A01G164000.1	AT1G68050.1	14749489
AT5G08590.1	TraesCS4B01G157500.1	AT1G68050.1	14749489
AT5G08590.1	TraesCS4A01G164000.1	AT1G68050.1	17872410
AT5G08590.1	TraesCS4B01G157500.1	AT1G68050.1	17872410
AT5G08590.1	TraesCS1A01G279100.1	AT2G39940.1	14749489
AT5G08590.1	TraesCS1B01G288100.1	AT2G39940.1	14749489
AT5G08590.1	TraesCS1D01G278400.1	AT2G39940.1	14749489
AT5G08590.1	TraesCS3A01G367500.1	AT2G39940.1	14749489
AT5G08590.1	TraesCS3B01G399200.1	AT2G39940.1	14749489
AT5G08590.1	TraesCS3D01G360400.2	AT2G39940.1	14749489
AT5G08590.1	TraesCS4A01G091200.1	AT2G39940.1	14749489
AT5G08590.1	TraesCS4B01G213500.1	AT2G39940.1	14749489
AT5G08590.1	TraesCS4D01G214200.1	AT2G39940.1	14749489

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G320500.1	Wheat	cytosol	99.72	99.72
TraesCS2A01G303900.1	Wheat	cytosol	99.72	99.72
HORVU2Hr1G075470.2	Barley	cytosol	99.44	99.44
Os04t0432000-02	Rice	cytosol	94.12	93.59
Zm00001d003659_P002	Maize	extracellular, plasma membrane	92.44	92.7
KXG26327	Sorghum	cytosol	90.48	85.68
GSMUA_Achr6P25570_001	Banana	cytosol	84.87	83.24
KRH41015	Soybean	endoplasmic reticulum	80.67	82.05
KRH59681	Soybean	endoplasmic reticulum	80.67	82.05
VIT_07s0031g03210.t01	Wine grape	cytosol	81.23	81.69
VIT_12s0035g00310.t01	Wine grape	cytosol	81.23	81.46
CDY46190	Canola	cytosol	79.55	80.68
KRH44077	Soybean	endoplasmic reticulum, nucleus	79.55	80.68
Bra031475.1-P	Field mustard	cytosol	79.55	80.68
GSMUA_Achr10P...	Banana	cytosol	78.15	80.17
KRH63934	Soybean	endoplasmic reticulum	78.15	79.94
KRH54011	Soybean	cytosol	77.31	79.77
GSMUA_Achr6P07250_001	Banana	cytosol	80.39	79.72
PGSC0003DMT400061170	Potato	cytosol	80.11	79.44
KRH26363	Soybean	nucleus	79.83	79.39
Solyc01g103940.2.1	Tomato	plastid	80.11	79.22
Solyc05g056550.2.1	Tomato	cytosol	78.43	78.65
CDY20973	Canola	cytosol	77.87	78.53
PGSC0003DMT400060263	Potato	cytosol	78.71	78.49
CDX84430	Canola	cytosol	77.31	78.41
Bra019889.1-P	Field mustard	cytosol	78.71	78.27
Bra018417.1-P	Field mustard	cytosol	77.59	78.25
CDY34860	Canola	cytosol	78.15	78.15
CDY41527	Canola	cytosol	77.87	77.87
Bra031740.1-P	Field mustard	cytosol	77.87	77.87
Bra038652.1-P	Field mustard	cytosol	77.87	77.87
CDY34668	Canola	cytosol	78.43	77.56
CDX97923	Canola	cytosol	78.43	77.35
AT1G60940.1	Thale cress	cytosol	77.59	76.73
AT5G08590.1	Thale cress	cytosol	75.35	76.2
AT1G10940.2	Thale cress	cytosol	78.99	76.01
AT5G63650.1	Thale cress	cytosol	76.47	75.83
TraesCS3D01G374300.1	Wheat	cytosol	75.91	74.66
CDX69936	Canola	cytosol	76.19	74.11
Bra009354.1-P	Field mustard	cytosol	76.19	73.51
CDX78346	Canola	cytosol	75.63	72.97
Bra006010.1-P	Field mustard	cytosol	75.63	72.58
CDX81116	Canola	cytosol	74.79	72.16
CDY21553	Canola	cytosol	75.91	71.88
TraesCS2D01G170700.1	Wheat	cytosol	66.67	69.79
TraesCS2D01G577000.1	Wheat	cytosol	76.19	69.57
CDY20594	Canola	cytosol	59.66	69.38
AT4G11373.1	Thale cress	cytosol	21.85	69.03
TraesCS2D01G493700.1	Wheat	cytosol	65.83	68.71
TraesCS1D01G218200.1	Wheat	cytosol	65.55	68.42
CDY19332	Canola	cytosol	78.71	67.71
TraesCS1D01G271000.1	Wheat	cytosol	69.75	66.76
TraesCS4D01G078100.2	Wheat	cytosol	66.95	66.2
Bra019890.1-P	Field mustard	cytosol	19.05	66.02
KRH43042	Soybean	cytosol	48.18	65.65
TraesCS5D01G081700.1	Wheat	cytosol	64.15	62.91
TraesCS5D01G411900.1	Wheat	cytosol	64.15	62.57
CDX97922	Canola	cytosol	40.9	59.59
TraesCS7D01G525100.1	Wheat	cytosol	45.94	52.73
CDY03768	Canola	cytosol	79.55	48.22
KRH30137	Soybean	extracellular, plasma membrane	11.76	35.0

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.2	Gene3D:3.30.200.20	ncoils:Coil	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0006950
GO:GO:0008150	GO:GO:0008152	GO:GO:0009605	GO:GO:0009607	GO:GO:0009987	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	GO:GO:0042742	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069
PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24343	PANTHER:PTHR24343:SF220
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	EnsemblPlantsGene:TraesCS2D01G302500
EnsemblPlants:TraesCS2D01G302500.1	TIGR:cd14662	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr2D:+:386248651..386252793

Molecular Weight (calculated)

40941.8 Da

IEP (calculated)

5.520

GRAVY (calculated)

-0.522

Length

357 amino acids

Sequence
(BLAST)

001: MERYELLKDI GAGNFGVARL MRNKETKELV AMKYIPRGLK IDENVAREII NHRSLRHPNI IRFKEVVVTP THLAIVMEYA AGGELFDRIC NAGRFSEDEA
101: RYFFQQLICG VSYCHFMQIC HRDLKLENTL LDGSPAPRLK ICDFGYSKSS LLHSKPKSTV GTPAYIAPEV LSRREYDGKT ADVWSCGVTL YVMLVGGYPF
201: EDPDDPKNFR KTIGRIMSIQ YKIPEYVHVS QDCKQLLASI FVANPAKRIT MREIRNHPWF LKNLPRELTE AAQAMYYKRD NSAPTYSVQS VEEIMKIVEE
301: AQKPPPSTTP VAGFGWAEED EQEDGKKPEE EVEEEDEEDE YEKQLNEVRA SGEFHIS

Best Arabidopsis Sequence Match ( AT1G10940.1 )
(BLAST)

001: MDKYELVKDI GAGNFGVARL MKVKNSKELV AMKYIERGPK IDENVAREII NHRSLRHPNI IRFKEVVLTP THLAIAMEYA AGGELFERIC SAGRFSEDEA
101: RYFFQQLISG VSYCHAMQIC HRDLKLENTL LDGSPAPRLK ICDFGYSKSS LLHSRPKSTV GTPAYIAPEV LSRREYDGKM ADVWSCGVTL YVMLVGAYPF
201: EDQEDPKNFR KTIQKIMAVQ YKIPDYVHIS QDCKNLLSRI FVANSLKRIT IAEIKKHSWF LKNLPRELTE TAQAAYFKKE NPTFSLQTVE EIMKIVADAK
301: TPPPVSRSIG GFGWGGNGDA DGKEEDAEDV EEEEEEVEEE EDDEDEYDKT VKEVHASGEV RIS

Arabidopsis Description

ASK1Protein kinase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I7B6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.