Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46190 | Canola | cytosol | 90.03 | 92.33 |
| Bra031475.1-P | Field mustard | cytosol | 90.03 | 92.33 |
| AT1G10940.2 | Thale cress | cytosol | 91.97 | 89.49 |
| PGSC0003DMT400061170 | Potato | cytosol | 86.15 | 86.39 |
| VIT_12s0035g00310.t01 | Wine grape | cytosol | 84.76 | 85.96 |
| Solyc01g103940.2.1 | Tomato | plastid | 85.87 | 85.87 |
| KRH44077 | Soybean | endoplasmic reticulum, nucleus | 82.55 | 84.66 |
| KRH26363 | Soybean | nucleus | 83.38 | 83.84 |
| Os04t0432000-02 | Rice | cytosol | 79.78 | 80.22 |
| EES06943 | Sorghum | cytosol | 78.67 | 78.02 |
| TraesCS2A01G303900.1 | Wheat | cytosol | 76.73 | 77.59 |
| TraesCS2B01G320500.1 | Wheat | cytosol | 76.73 | 77.59 |
| TraesCS2D01G302500.1 | Wheat | cytosol, golgi | 76.73 | 77.59 |
| AT5G63650.1 | Thale cress | cytosol | 77.29 | 77.5 |
| HORVU2Hr1G075470.2 | Barley | cytosol | 76.45 | 77.31 |
| AT5G08590.1 | Thale cress | cytosol | 75.35 | 77.05 |
| Os02t0551100-01 | Rice | plasma membrane | 77.01 | 76.16 |
| KXG26327 | Sorghum | cytosol | 78.12 | 74.8 |
| AT2G23030.1 | Thale cress | cytosol | 67.31 | 71.68 |
| AT4G11373.1 | Thale cress | cytosol | 21.61 | 69.03 |
| AT4G33950.1 | Thale cress | cytosol | 67.59 | 67.4 |
| AT1G78290.2 | Thale cress | cytosol | 63.16 | 66.47 |
| AT5G66880.1 | Thale cress | cytosol | 64.27 | 64.27 |
| AT4G40010.1 | Thale cress | cytosol | 61.77 | 63.71 |
| AT3G50500.2 | Thale cress | cytosol | 63.16 | 61.79 |
| CDY03768 | Canola | cytosol | 89.2 | 54.67 |
Protein Annotations
| Gene3D:1.10.510.10 | MapMan:18.4.5.2 | Gene3D:3.30.200.20 | EntrezGene:842385 | ProteinID:AAG51649.1 | ProteinID:AEE33750.1 |
| ProteinID:AEE33751.1 | ArrayExpress:AT1G60940 | EnsemblPlantsGene:AT1G60940 | RefSeq:AT1G60940 | TAIR:AT1G60940 | RefSeq:AT1G60940-TAIR-G |
| EnsemblPlants:AT1G60940.1 | TAIR:AT1G60940.1 | EMBL:AY072340 | EMBL:AY088802 | Unigene:At.25609 | EMBL:BT002546 |
| ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004672 | GO:GO:0004674 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006464 | GO:GO:0006468 | GO:GO:0006950 | GO:GO:0006970 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 |
| GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0016301 | GO:GO:0016310 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0035556 | GO:GO:0048527 | GO:GO:0070300 | InterPro:IPR000719 |
| InterPro:Kinase-like_dom_sf | RefSeq:NP_176290.1 | RefSeq:NP_849834.1 | PFAM:PF00069 | PIRSF:PIRSF000654 | PO:PO:0000005 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00107 | ScanProsite:PS00108 | PFscan:PS50011 |
| PANTHER:PTHR24343 | PANTHER:PTHR24343:SF161 | InterPro:Prot_kinase_dom | InterPro:Protein_kinase_ATP_BS | UniProt:Q9C958 | SMART:SM00220 |
| Symbol:SNRK2-10 | SUPFAM:SSF56112 | InterPro:Ser/Thr_kinase_AS | UniParc:UPI00000AC27C | SEG:seg | : |
Description
SRK2BSerine/threonine-protein kinase SRK2B [Source:UniProtKB/Swiss-Prot;Acc:Q9C958]
Coordinates
chr1:-:22439063..22442221
Molecular Weight (calculated)
41042.1 Da
IEP (calculated)
5.683
GRAVY (calculated)
-0.439
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MDKYELVKDI GAGNFGVARL MRVKNSKELV AMKYIERGPK IDENVAREII NHRSLRHPNI IRFKEVVLTP THIAIAMEYA AGGELFERIC SAGRFSEDEA
101: RYFFQQLISG VSYCHAMQIC HRDLKLENTL LDGSPAPRLK ICDFGYSKSS LLHSMPKSTV GTPAYIAPEV LSRGEYDGKM ADVWSCGVTL YVMLVGAYPF
201: EDQEDPKNFK KTIQRIMAVK YKIPDYVHIS QDCKHLLSRI FVTNSNKRIT IGDIKKHPWF LKNLPRELTE IAQAAYFRKE NPTFSLQSVE EIMKIVEEAK
301: TPARVSRSIG AFGWGGGEDA EGKEEDAEEE VEEVEEEEDE EDEYDKTVKQ VHASMGEVRV S
101: RYFFQQLISG VSYCHAMQIC HRDLKLENTL LDGSPAPRLK ICDFGYSKSS LLHSMPKSTV GTPAYIAPEV LSRGEYDGKM ADVWSCGVTL YVMLVGAYPF
201: EDQEDPKNFK KTIQRIMAVK YKIPDYVHIS QDCKHLLSRI FVTNSNKRIT IGDIKKHPWF LKNLPRELTE IAQAAYFRKE NPTFSLQSVE EIMKIVEEAK
301: TPARVSRSIG AFGWGGGEDA EGKEEDAEEE VEEVEEEEDE EDEYDKTVKQ VHASMGEVRV S
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.