Factsheet for Bra031475.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra006216.1-P
Bra008801.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G60940.1	Bra006216.1-P	AT5G13810.1	21798944
AT1G60940.1	Bra008801.1-P	AT5G13810.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46190	Canola	cytosol	100.0	100.0
Bra018417.1-P	Field mustard	cytosol	90.62	90.11
AT1G60940.1	Thale cress	cytosol	92.33	90.03
Bra019889.1-P	Field mustard	cytosol	91.19	89.42
Bra031740.1-P	Field mustard	cytosol	90.62	89.36
KRH44077	Soybean	endoplasmic reticulum, nucleus	87.22	87.22
PGSC0003DMT400061170	Potato	cytosol	88.92	86.94
VIT_12s0035g00310.t01	Wine grape	cytosol	87.78	86.8
Solyc01g103940.2.1	Tomato	plastid	88.92	86.7
KRH26363	Soybean	nucleus	87.22	85.52
Os04t0432000-02	Rice	cytosol	83.24	81.62
EES06943	Sorghum	cytosol	82.67	79.95
TraesCS2A01G303900.1	Wheat	cytosol	80.68	79.55
TraesCS2B01G320500.1	Wheat	cytosol	80.68	79.55
TraesCS2D01G302500.1	Wheat	cytosol, golgi	80.68	79.55
HORVU2Hr1G075470.2	Barley	cytosol	80.4	79.27
Os02t0551100-01	Rice	plasma membrane	81.25	78.36
Bra038652.1-P	Field mustard	cytosol	79.26	78.15
KXG26327	Sorghum	cytosol	80.97	75.6
Bra009354.1-P	Field mustard	cytosol	78.41	74.59
Bra032188.1-P	Field mustard	cytosol	70.17	72.43
Bra006010.1-P	Field mustard	cytosol	76.42	72.31
Bra019890.1-P	Field mustard	cytosol	20.45	69.9
Bra011481.1-P	Field mustard	cytosol	71.31	69.34
Bra017615.1-P	Field mustard	cytosol	69.89	67.96
Bra011815.1-P	Field mustard	cytosol	65.06	65.99
Bra012113.1-P	Field mustard	cytosol	65.62	64.71
Bra012897.1-P	Field mustard	cytosol	64.77	63.16
Bra017866.1-P	Field mustard	cytosol, nucleus, plastid	20.17	61.74
CDY03768	Canola	cytosol	98.86	59.08
Bra035026.1-P	Field mustard	cytosol	25.85	53.85
Bra003650.1-P	Field mustard	cytosol	67.05	49.37

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.2	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra031475	EnsemblPlants:Bra031475.1	EnsemblPlants:Bra031475.1-P
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0006464	GO:GO:0006468	GO:GO:0006950	GO:GO:0006970	GO:GO:0007275	GO:GO:0008150
GO:GO:0008152	GO:GO:0008289	GO:GO:0009628	GO:GO:0009651	GO:GO:0009791	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	GO:GO:0048527	GO:GO:0070300
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	UniProt:M4ERP9	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24343	PANTHER:PTHR24343:SF161	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI0002544E4F	SEG:seg	:

Description

AT1G60940 (E=4e-175) SNRK2-10, SNRK2.10, SRK2B | SNRK2.10 (SNF1-RELATED PROTEIN KINASE 2.10); kinase

Coordinates

chrA01:-:17126849..17129234

Molecular Weight (calculated)

40221.3 Da

IEP (calculated)

6.361

GRAVY (calculated)

-0.383

Length

352 amino acids

Sequence
(BLAST)

001: MEKYELVKDI GSGNFGVARL MRVKDSKELV AMKYIERGPK IDENVAREII NHRSLRHPNI IRFKEVVLTP THIAIVMEYA AGGELFERIC SAGRFSEDEA
101: RYFFQQLISG VSYCHAMQIC HRDLKLENTL LDGSPAPRLK ICDFGYSKSS LLHSRPKSTV GTPAYIAPEV LSRREYDGKM ADVWSCGVTL YVMLVGAYPF
201: EDPEDPKNFR KTMQRILAVQ YKIPDYVHIS QDCKHILSRI FVANPLKRIT IAEIKKHPWF LKNLPRELTE IAQAAYYRKE NPTFSLQSVE EIMKIVEEAK
301: TPPPVSRSIG AFGWGGEEDA EEVSEEVVEE DEEDEYDKTV KQVHASGEIR IS

Best Arabidopsis Sequence Match ( AT1G60940.2 )
(BLAST)

001: MDKYELVKDI GAGNFGVARL MRVKNSKELV AMKYIERGPK IDENVAREII NHRSLRHPNI IRFKEVVLTP THIAIAMEYA AGGELFERIC SAGRFSEDEA
101: RYFFQQLISG VSYCHAMQIC HRDLKLENTL LDGSPAPRLK ICDFGYSKSS LLHSMPKSTV GTPAYIAPEV LSRGEYDGKM ADVWSCGVTL YVMLVGAYPF
201: EDQEDPKNFK KTIQRIMAVK YKIPDYVHIS QDCKHLLSRI FVTNSNKRIT IGDIKKHPWF LKNLPRELTE IAQAAYFRKE NPTFSLQSVE EIMKIVEEAK
301: TPARVSRSIG AFGWGGGEDA EGKEEDAEEE VEEVEEEEDE EDEYDKTVKQ VHASMGEVRV S

Arabidopsis Description

SRK2BSerine/threonine-protein kinase SRK2B [Source:UniProtKB/Swiss-Prot;Acc:Q9C958]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.