Factsheet for Bra017615.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra010441.1-P
Bra013945.1-P
Bra019121.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33950.1	Bra010441.1-P	AT4G26080.1	16365038
AT4G33950.1	Bra013945.1-P	AT4G26080.1	16365038
AT4G33950.1	Bra019121.1-P	AT4G26080.1	16365038
AT4G33950.1	Bra010441.1-P	AT4G26080.1	19874541
AT4G33950.1	Bra013945.1-P	AT4G26080.1	19874541
AT4G33950.1	Bra019121.1-P	AT4G26080.1	19874541

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY72554	Canola	cytosol	79.56	99.65
AT4G33950.1	Thale cress	cytosol	95.3	95.3
Bra011481.1-P	Field mustard	cytosol	94.75	94.75
KRG89230	Soybean	cytosol	89.5	89.01
Solyc01g108280.2.1	Tomato	cytosol	88.95	88.95
PGSC0003DMT400066617	Potato	cytosol, nucleus	88.95	88.95
KRH71186	Soybean	endoplasmic reticulum	86.19	88.14
KRH49772	Soybean	cytosol	88.95	87.03
VIT_03s0063g01080.t01	Wine grape	cytosol	86.74	86.5
KRH50231	Soybean	cytosol	87.02	85.83
Bra012113.1-P	Field mustard	cytosol	77.9	78.99
Bra012897.1-P	Field mustard	cytosol	74.59	74.79
Bra031475.1-P	Field mustard	cytosol	67.96	69.89
Bra018417.1-P	Field mustard	cytosol	66.3	67.8
Bra031740.1-P	Field mustard	cytosol	66.57	67.51
Bra011815.1-P	Field mustard	cytosol	63.81	66.57
Bra019889.1-P	Field mustard	cytosol	65.75	66.3
Bra038652.1-P	Field mustard	cytosol	64.36	65.27
Bra032188.1-P	Field mustard	cytosol	59.94	63.64
Bra019890.1-P	Field mustard	cytosol	17.96	63.11
Bra009354.1-P	Field mustard	cytosol	64.36	62.97
Bra006010.1-P	Field mustard	cytosol	64.09	62.37
Bra017866.1-P	Field mustard	cytosol, nucleus, plastid	17.96	56.52
Bra035026.1-P	Field mustard	cytosol	26.24	56.21
Bra003650.1-P	Field mustard	cytosol	64.09	48.54

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.5.2	MapMan:26.2.1.3	Gene3D:3.30.200.20	EnsemblPlantsGene:Bra017615	EnsemblPlants:Bra017615.1
EnsemblPlants:Bra017615.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:Kinase-like_dom_sf	UniProt:M4DM83	PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108
PFscan:PS50011	PANTHER:PTHR24343	PANTHER:PTHR24343:SF162	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220
SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI000254117C	SEG:seg	:	:

Description

AT4G33950 (E=6e-188) OST1, SNRK2-6, SRK2E, SNRK2.6, P44 | OST1 (OPEN STOMATA 1); calcium-dependent protein serine/threonine kinase/ kinase/ protein kinase

Coordinates

chrA03:+:29326338..29328337

Molecular Weight (calculated)

40871.6 Da

IEP (calculated)

4.549

GRAVY (calculated)

-0.295

Length

362 amino acids

Sequence
(BLAST)

001: MDRPAVSGPM DLPIMHDSDR YELVKDIGSG NFGVARLMRD KQSNELVAVK YIERGEKIDE NVKREIINHR SLRHPNIVRF KEVILTPTHL AIVMEYAAGG
101: ELFERICNAG LFSEDEARFF FQQLISGVSY CHAMQVCHRD LKLENTLLDG SPAPRLKICD FGYSKSSVLH SQPKSTVGTP AYIAPEVLLK KEYDGKLADV
201: WSCGVTLYVM LVGAYPFEDP DEPKNFKKTI HRILNVQYAI PDYVHISPEC QHLISRIFVA DSAKRISIPE IRNHEWFLKN LPADIMNDNV MNSQFDESDQ
301: PGQSIEEIMQ IVAEATVPPA GTQSLNQYLT GSLDLEDDMD EDLESDLDDL DIDSSGEIVY AM

Best Arabidopsis Sequence Match ( AT4G33950.1 )
(BLAST)

001: MDRPAVSGPM DLPIMHDSDR YELVKDIGSG NFGVARLMRD KQSNELVAVK YIERGEKIDE NVKREIINHR SLRHPNIVRF KEVILTPTHL AIVMEYASGG
101: ELFERICNAG RFSEDEARFF FQQLISGVSY CHAMQVCHRD LKLENTLLDG SPAPRLKICD FGYSKSSVLH SQPKSTVGTP AYIAPEVLLK KEYDGKVADV
201: WSCGVTLYVM LVGAYPFEDP EEPKNFRKTI HRILNVQYAI PDYVHISPEC RHLISRIFVA DPAKRISIPE IRNHEWFLKN LPADLMNDNT MTTQFDESDQ
301: PGQSIEEIMQ IIAEATVPPA GTQNLNHYLT GSLDIDDDME EDLESDLDDL DIDSSGEIVY AM

Arabidopsis Description

SRK2ESerine/threonine-protein kinase SRK2E [Source:UniProtKB/Swiss-Prot;Acc:Q940H6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.