Factsheet for VIT_03s0063g01080.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG89230	Soybean	cytosol	92.84	92.58
Solyc01g108280.2.1	Tomato	cytosol	91.46	91.71
PGSC0003DMT400066617	Potato	cytosol, nucleus	91.46	91.71
CDY72554	Canola	cytosol	72.73	91.35
KRH49772	Soybean	cytosol	92.01	90.27
KRH71186	Soybean	endoplasmic reticulum	87.88	90.11
AT4G33950.1	Thale cress	cytosol	88.71	88.95
KRH50231	Soybean	cytosol	89.81	88.83
CDX75391	Canola	cytosol	86.78	87.26
Bra011481.1-P	Field mustard	cytosol	86.78	87.02
CDX69016	Canola	cytosol	86.78	87.02
Bra017615.1-P	Field mustard	cytosol	86.5	86.74
VIT_07s0197g00080.t01	Wine grape	cytosol	82.92	83.38
VIT_02s0236g00130.t01	Wine grape	cytosol	69.7	74.41
VIT_00s0710g00020.t01	Wine grape	cytosol	67.77	72.78
VIT_07s0191g00070.t01	Wine grape	cytosol	67.77	72.78
VIT_18s0001g06310.t01	Wine grape	cytosol	65.84	71.34
VIT_12s0035g00310.t01	Wine grape	cytosol	68.32	69.66
VIT_07s0031g03210.t01	Wine grape	cytosol	66.94	68.45

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100245171	wikigene:100245171	MapMan:18.4.5.2	MapMan:26.2.1.3	Gene3D:3.30.200.20
EMBL:AM433420	ProteinID:CAN62745	ProteinID:CAN62745.1	ProteinID:CBI32467	ProteinID:CBI32467.3	UniProt:D7TPP4
EMBL:FN596006	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0005975	GO:GO:0005985	GO:GO:0006464
GO:GO:0006468	GO:GO:0006629	GO:GO:0006636	GO:GO:0006810	GO:GO:0006950	GO:GO:0006970
GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009414	GO:GO:0009605	GO:GO:0009607	GO:GO:0009628	GO:GO:0009651	GO:GO:0009719
GO:GO:0009737	GO:GO:0009789	GO:GO:0009987	GO:GO:0010118	GO:GO:0010119	GO:GO:0010359
GO:GO:0016301	GO:GO:0016740	GO:GO:0019432	GO:GO:0019538	GO:GO:0019903	GO:GO:0035556
GO:GO:0042742	GO:GO:0042802	GO:GO:0046777	GO:GO:0048366	GO:GO:1902456	GO:GO:2000377
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100245171	wikigene:LOC100245171	PFAM:PF00069	PIRSF:PIRSF000654
ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24343	PANTHER:PTHR24343:SF162	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00015C89CF	ArrayExpress:VIT_03s0063g01080
EnsemblPlantsGene:VIT_03s0063g01080	EnsemblPlants:VIT_03s0063g01080.t01	unigene:Vvi.22927	RefSeq:XP_002284959	RefSeq:XP_002284959.1	RefSeq:XP_003631617
RefSeq:XP_003631617.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3:+:4514299..4520674

Molecular Weight (calculated)

41235.3 Da

IEP (calculated)

4.613

GRAVY (calculated)

-0.313

Length

363 amino acids

Sequence
(BLAST)

001: MDRSAITVGP AMDVPIMHDS DRYELVRDIG SGNFGVARLM RDKQTGELVA VKYIERGEKI DENVQREIIN HRSLRHPNIV RFKEVILTPT HLAIVMEYAS
101: GGELFERICN AGRFSEDEAR FFFQQLVSGV SYCHAMQVCH RDLKLENTLL DGSPAPRLKI CDFGYSKSSV LHSQPKSTVG TPAYIAPEVL LKKEYDGKIA
201: DVWSCGVTLY VMLVGAYPFE DPEEPKNFHK TIQRILKVQY SIPDYVHISP ECRHLISRIF VADPATRITI AEIRNHEWFL KNLPADLMDE TKMDNQYEEP
301: EQPMQSIDEI MRIIGEAMIP AAGTQSLNQY LTGSLDIDDE MEEDLETDPD LDIDSSGEIV YAM

Best Arabidopsis Sequence Match ( AT4G33950.1 )
(BLAST)

001: MDRPAVSGPM DLPIMHDSDR YELVKDIGSG NFGVARLMRD KQSNELVAVK YIERGEKIDE NVKREIINHR SLRHPNIVRF KEVILTPTHL AIVMEYASGG
101: ELFERICNAG RFSEDEARFF FQQLISGVSY CHAMQVCHRD LKLENTLLDG SPAPRLKICD FGYSKSSVLH SQPKSTVGTP AYIAPEVLLK KEYDGKVADV
201: WSCGVTLYVM LVGAYPFEDP EEPKNFRKTI HRILNVQYAI PDYVHISPEC RHLISRIFVA DPAKRISIPE IRNHEWFLKN LPADLMNDNT MTTQFDESDQ
301: PGQSIEEIMQ IIAEATVPPA GTQNLNHYLT GSLDIDDDME EDLESDLDDL DIDSSGEIVY AM

Arabidopsis Description

SRK2ESerine/threonine-protein kinase SRK2E [Source:UniProtKB/Swiss-Prot;Acc:Q940H6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.