Factsheet for VIT_07s0197g00080.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_02s0012g01270.t01
VIT_04s0008g00270.t01
VIT_08s0058g00230.t01
VIT_13s0175g00110.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66880.1	VIT_02s0012g01270.t01	AT4G17870.1	19874541
AT5G66880.1	VIT_04s0008g00270.t01	AT4G17870.1	19874541
AT5G66880.1	VIT_08s0058g00230.t01	AT4G17870.1	19874541
AT5G66880.1	VIT_13s0175g00110.t01	AT4G17870.1	19874541

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g090390.2.1	Tomato	cytosol	82.27	84.38
KRH76943	Soybean	cytosol, extracellular, plasma membrane	13.3	84.21
KRH04679	Soybean	nucleus, plastid	83.38	83.61
GSMUA_Achr4P28190_001	Banana	cytosol	83.93	83.47
CDY01456	Canola	cytosol	83.38	83.15
CDY12785	Canola	cytosol	83.38	83.15
KRH57751	Soybean	nucleus	82.83	83.06
VIT_03s0063g01080.t01	Wine grape	cytosol	83.38	82.92
Bra012113.1-P	Field mustard	cytosol	81.99	82.91
AT5G66880.1	Thale cress	cytosol	82.83	82.83
KRH28516	Soybean	cytosol	81.16	81.62
GSMUA_Achr4P23200_001	Banana	cytosol	82.83	81.47
KRH76942	Soybean	cytosol	67.87	81.13
GSMUA_Achr2P13360_001	Banana	cytosol	81.99	81.1
Zm00001d013736_P001	Maize	cytosol	80.89	80.66
EER91234	Sorghum	cytosol	80.89	80.66
CDY02082	Canola	cytosol	80.61	80.61
Bra012897.1-P	Field mustard	cytosol	80.61	80.61
Os03t0610900-01	Rice	cytosol	80.61	80.39
CDY23007	Canola	cytosol	80.06	80.06
HORVU4Hr1G013540.3	Barley	cytosol	79.78	79.78
TraesCS4A01G235600.2	Wheat	cytosol	79.78	79.78
TraesCS4B01G079300.1	Wheat	cytosol	79.78	79.78
TraesCS4D01G078100.2	Wheat	cytosol	79.78	79.78
TraesCS5D01G411900.1	Wheat	cytosol	80.61	79.51
HORVU5Hr1G097630.1	Barley	cytosol	80.61	79.51
TraesCS5B01G406400.1	Wheat	cytosol	80.61	79.51
TraesCS5A01G401700.1	Wheat	cytosol	80.61	79.51
EER93398	Sorghum	cytosol	80.33	79.23
AT3G50500.2	Thale cress	cytosol	80.89	79.13
Zm00001d033339_P002	Maize	cytosol, extracellular	78.95	78.3
Os03t0764800-01	Rice	plasma membrane	80.33	78.17
HORVU0Hr1G011570.1	Barley	cytosol	76.18	77.03
Os12t0586100-01	Rice	cytosol	77.01	77.01
KRH28215	Soybean	cytosol, plastid, vacuole	25.76	76.86
TraesCS5A01G069500.1	Wheat	cytosol	76.45	76.67
TraesCS5B01G075800.1	Wheat	cytosol	77.01	76.58
TraesCS5D01G081700.1	Wheat	cytosol	77.01	76.37
Zm00001d013201_P003	Maize	cytosol	80.06	76.05
EES17292	Sorghum	cytosol	75.35	74.73
HORVU5Hr1G018340.2	Barley	cytosol	76.18	74.12
VIT_02s0236g00130.t01	Wine grape	cytosol	69.25	73.53
VIT_07s0191g00070.t01	Wine grape	cytosol	67.59	72.19
VIT_00s0710g00020.t01	Wine grape	cytosol	67.59	72.19
VIT_18s0001g06310.t01	Wine grape	cytosol	66.48	71.64
Zm00001d034161_P003	Maize	cytosol	78.67	71.18
VIT_07s0031g03210.t01	Wine grape	cytosol	67.59	68.73
VIT_12s0035g00310.t01	Wine grape	cytosol	65.93	66.85
Zm00001d024775_P002	Maize	cytosol	19.11	63.89
Zm00001d020262_P003	Maize	cytosol	9.97	49.32
Zm00001d011604_P003	Maize	mitochondrion	32.69	24.84

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100240941	wikigene:100240941	MapMan:18.4.5.2	Gene3D:3.30.200.20	ProteinID:CCB48255
ProteinID:CCB48255.1	UniProt:F6H7R3	EMBL:FN595251	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006464	GO:GO:0006468	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740
GO:GO:0019538	GO:GO:0035556	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100240941	wikigene:LOC100240941
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24343
PANTHER:PTHR24343:SF162	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI00015CDF12	ArrayExpress:VIT_07s0197g00080	EnsemblPlantsGene:VIT_07s0197g00080	EnsemblPlants:VIT_07s0197g00080.t01	unigene:Vvi.23976	RefSeq:XP_002264172
RefSeq:XP_002264172.1	RefSeq:XP_003632463	RefSeq:XP_003632463.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr7:+:14601032..14607122

Molecular Weight (calculated)

40829.8 Da

IEP (calculated)

4.621

GRAVY (calculated)

-0.253

Length

361 amino acids

Sequence
(BLAST)

001: MDRSTLALGP IMDLPIMHDS DRYDFVRDIG SGNFGIARLM RDKLTKELVA VKYIERGDKI DENVQREIIN HRSLRHPNIV RFKEVILTPT HLAIVMEYAA
101: GGELFERICK AGRFIEDEAR FFFQQLISGV SYCHAMQICH RDLKLENTLL DGSPAPRLKI CDFGYSKSSV LHSQPKSTVG TPAYIAPEVL MRQEYDGKIA
201: DVWSCGVTLY VMLVGAYPFE DPDEPKDFRK TIQRILSVQY SIPSSVQIST ECHHLISRIF VADPGARITI PEIKNHEWFL KNLPADLMDE KTIGNQFEEP
301: DQPMQSHDEI MGIISEATVP APGVYGLNSY MTDGLDMDDD MDLENDSDID VDSSGEVVYA M

Best Arabidopsis Sequence Match ( AT5G66880.1 )
(BLAST)

001: MDRAPVTTGP LDMPIMHDSD RYDFVKDIGS GNFGVARLMR DKLTKELVAV KYIERGDKID ENVQREIINH RSLRHPNIVR FKEVILTPTH LAIIMEYASG
101: GELYERICNA GRFSEDEARF FFQQLLSGVS YCHSMQICHR DLKLENTLLD GSPAPRLKIC DFGYSKSSVL HSQPKSTVGT PAYIAPEVLL RQEYDGKIAD
201: VWSCGVTLYV MLVGAYPFED PEEPRDYRKT IQRILSVKYS IPDDIRISPE CCHLISRIFV ADPATRISIP EIKTHSWFLK NLPADLMNES NTGSQFQEPE
301: QPMQSLDTIM QIISEATIPA VRNRCLDDFM TDNLDLDDDM DDFDSESEID IDSSGEIVYA L

Arabidopsis Description

SRK2ISerine/threonine-protein kinase SRK2I [Source:UniProtKB/Swiss-Prot;Acc:Q39193]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.