Factsheet for Zm00001d013201_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d030045_P001
Zm00001d047037_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66880.1	Zm00001d030045_P001	AT4G17870.1	19874541
AT5G66880.1	Zm00001d047037_P001	AT4G17870.1	19874541

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93398	Sorghum	cytosol	95.26	98.91
HORVU5Hr1G097630.1	Barley	cytosol	90.26	93.72
TraesCS5A01G401700.1	Wheat	cytosol	89.74	93.17
TraesCS5D01G411900.1	Wheat	cytosol	89.74	93.17
TraesCS5B01G406400.1	Wheat	cytosol	89.74	93.17
Os03t0764800-01	Rice	plasma membrane	90.0	92.18
Zm00001d034161_P003	Maize	cytosol	92.63	88.22
GSMUA_Achr4P28190_001	Banana	cytosol	82.89	86.78
Zm00001d013736_P001	Maize	cytosol	82.63	86.74
Zm00001d033339_P002	Maize	cytosol, extracellular	81.05	84.62
GSMUA_Achr2P13360_001	Banana	cytosol	81.05	84.38
KRH76943	Soybean	cytosol, extracellular, plasma membrane	12.63	84.21
GSMUA_Achr4P23200_001	Banana	cytosol	80.79	83.65
Solyc02g090390.2.1	Tomato	cytosol	76.58	82.67
KRH57751	Soybean	nucleus	76.58	80.83
KRH04679	Soybean	nucleus, plastid	76.32	80.56
VIT_07s0197g00080.t01	Wine grape	cytosol	76.05	80.06
KRH28516	Soybean	cytosol	75.0	79.39
AT5G66880.1	Thale cress	cytosol	75.0	78.95
KRH76942	Soybean	cytosol	62.63	78.81
CDY12785	Canola	cytosol	74.74	78.45
CDY01456	Canola	cytosol	74.74	78.45
Bra012113.1-P	Field mustard	cytosol	73.42	78.15
CDY23007	Canola	cytosol	72.89	76.73
CDY02082	Canola	cytosol	72.63	76.45
Bra012897.1-P	Field mustard	cytosol	72.63	76.45
KRH28215	Soybean	cytosol, plastid, vacuole	24.21	76.03
AT3G50500.2	Thale cress	cytosol	73.16	75.34
Zm00001d003758_P001	Maize	extracellular, mitochondrion, plasma membrane	19.47	71.15
Zm00001d022179_P001	Maize	cytosol	62.89	69.28
Zm00001d047220_P003	Maize	cytosol	63.95	68.64
Zm00001d024775_P002	Maize	cytosol	19.47	68.52
Zm00001d029975_P003	Maize	cytosol, extracellular	59.47	67.87
Zm00001d003659_P002	Maize	extracellular, plasma membrane	60.79	64.89
Zm00001d050723_P001	Maize	cytosol	62.11	64.84
Zm00001d016783_P001	Maize	cytosol	61.32	64.01
Zm00001d038326_P003	Maize	cytosol	59.21	62.67
Zm00001d026690_P001	Maize	cytosol	59.74	62.53
Zm00001d012263_P002	Maize	cytosol	60.79	61.44
Zm00001d042695_P002	Maize	cytosol	61.05	59.18
Zm00001d020262_P003	Maize	cytosol	10.26	53.42
CDY52825	Canola	plasma membrane	22.63	51.5
Zm00001d042188_P001	Maize	plastid	23.68	45.0
Zm00001d047445_P001	Maize	plastid	16.32	29.25
Zm00001d011604_P003	Maize	mitochondrion	32.89	26.32

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100191986	MapMan:18.4.5.2	Gene3D:3.30.200.20	UniProt:A0A1D6GGG2	ProteinID:AQK62650.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488
GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf
PFAM:PF00069	PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24343
PANTHER:PTHR24343:SF162	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS
UniParc:UPI0008436AED	EnsemblPlantsGene:Zm00001d013201	EnsemblPlants:Zm00001d013201_P003	EnsemblPlants:Zm00001d013201_T003	SEG:seg	:

Description

Serine/threonine-protein kinase SRK2E

Coordinates

chr5:+:6396505..6403575

Molecular Weight (calculated)

42973.4 Da

IEP (calculated)

4.627

GRAVY (calculated)

-0.297

Length

380 amino acids

Sequence
(BLAST)

001: MAGPAPDRAA LTVGPGMDMP IMHDSDRYEL VRDIGSGNFG VARLMRDRRT TELVAVKYIE RGEKIDENVQ REIINHRSLK HPNIIRFKEV ILTPTHLAIV
101: MEYASGGELF ERICKNVRFS EDEARYFFQQ LISGVSYCHS MQVCHRDLKL ENTLLDGSDA PRLKICDFGY SKSSVLHSQP KSTVGTPAYI APEVLLKKEY
201: DGKIADVWSC GVTLYVMAVG AYPFEDPEEP KNFRKTIQRI LNVQYAIPDY VNISPECRHL ISRIFVGDPA MASPCSYNRA LILIQRITIT EIRNHSWFLK
301: NLPADLMDDD SMSNQYEEPD QPMQTMDQIM QILTEATIPP ACSRSINVLA DGLDMDDDMD DLDSDSDLDV DSSGEIVYAM

Best Arabidopsis Sequence Match ( AT3G50500.1 )
(BLAST)

001: MDPATNSPIM PIDLPIMHDS DRYDFVKDIG SGNFGVARLM TDRVTKELVA VKYIERGEKI DENVQREIIN HRSLRHPNIV RFKEVILTPS HLAIVMEYAA
101: GGELYERICN AGRFSEDEAR FFFQQLISGV SYCHAMQICH RDLKLENTLL DGSPAPRLKI CDFGYSKSSV LHSQPKSTVG TPAYIAPEIL LRQEYDGKLA
201: DVWSCGVTLY VMLVGAYPFE DPQEPRDYRK TIQRILSVTY SIPEDLHLSP ECRHLISRIF VADPATRITI PEITSDKWFL KNLPGDLMDE NRMGSQFQEP
301: EQPMQSLDTI MQIISEATIP TVRNRCLDDF MADNLDLDDD MDDFDSESEI DVDSSGEIVY AL

Arabidopsis Description

SPK-2-2SNF1-related protein kinase 2.2 [Source:UniProtKB/TrEMBL;Acc:F4J0N1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.