Factsheet for Zm00001d013736_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

cytosol: 29344831
nucleus: 29344831

gfp PMID: 29344831 doi

YG Wang, FL Fu, HQ Yu, T Hu, YY Zhang, Y Tao, JK Zhu, Y Zhao, WC Li

Maize Research Institute, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China., Maize Research Institute, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China. aumdyms@sicau.edu.cn., Shanghai Center for Plant Stress Biology, and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China., Shanghai Center for Plant Stress Biology, and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China. zhaoyang@sibs.ac.cn.

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d030045_P001
Zm00001d047037_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66880.1	Zm00001d030045_P001	AT4G17870.1	19874541
AT5G66880.1	Zm00001d047037_P001	AT4G17870.1	19874541

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER91234	Sorghum	cytosol	97.79	97.79
Os03t0610900-01	Rice	cytosol	95.03	95.03
Zm00001d033339_P002	Maize	cytosol, extracellular	95.03	94.51
TraesCS4D01G078100.2	Wheat	cytosol	94.2	94.46
TraesCS4B01G079300.1	Wheat	cytosol	94.2	94.46
TraesCS4A01G235600.2	Wheat	cytosol	94.2	94.46
HORVU4Hr1G013540.3	Barley	cytosol	94.2	94.46
GSMUA_Achr4P28190_001	Banana	cytosol	89.78	89.53
GSMUA_Achr2P13360_001	Banana	cytosol	87.02	86.3
GSMUA_Achr4P23200_001	Banana	cytosol	85.91	84.74
Zm00001d013201_P003	Maize	cytosol	86.74	82.63
KRH57751	Soybean	nucleus	81.49	81.94
Solyc02g090390.2.1	Tomato	cytosol	79.56	81.82
KRH04679	Soybean	nucleus, plastid	81.22	81.67
VIT_07s0197g00080.t01	Wine grape	cytosol	80.66	80.89
AT5G66880.1	Thale cress	cytosol	80.39	80.61
KRH76942	Soybean	cytosol	67.13	80.46
Bra012113.1-P	Field mustard	cytosol	79.28	80.39
CDY12785	Canola	cytosol	80.39	80.39
CDY01456	Canola	cytosol	80.39	80.39
KRH28516	Soybean	cytosol	79.56	80.22
KRH76943	Soybean	cytosol, extracellular, plasma membrane	12.43	78.95
CDY23007	Canola	cytosol	77.62	77.84
CDY02082	Canola	cytosol	77.62	77.84
Bra012897.1-P	Field mustard	cytosol	77.62	77.84
Zm00001d034161_P003	Maize	cytosol	85.08	77.19
AT3G50500.2	Thale cress	cytosol	78.18	76.69
Zm00001d024775_P002	Maize	cytosol	22.65	75.93
KRH28215	Soybean	cytosol, plastid, vacuole	24.86	74.38
Zm00001d022179_P001	Maize	cytosol	67.96	71.3
Zm00001d047220_P003	Maize	cytosol	68.78	70.34
Zm00001d003758_P001	Maize	extracellular, mitochondrion, plasma membrane	19.89	69.23
Zm00001d029975_P003	Maize	cytosol, extracellular	62.71	68.17
Zm00001d003659_P002	Maize	extracellular, plasma membrane	65.75	66.85
Zm00001d050723_P001	Maize	cytosol	66.57	66.21
Zm00001d016783_P001	Maize	cytosol	65.75	65.38
Zm00001d020262_P003	Maize	cytosol	12.98	64.38
Zm00001d026690_P001	Maize	cytosol	63.54	63.36
Zm00001d038326_P003	Maize	cytosol	62.15	62.67
Zm00001d012263_P002	Maize	cytosol	64.92	62.5
Zm00001d042695_P002	Maize	cytosol	65.19	60.2
CDY52825	Canola	plasma membrane	25.41	55.09
Zm00001d042188_P001	Maize	plastid	25.14	45.5
Zm00001d011604_P003	Maize	mitochondrion	39.5	30.11
Zm00001d047445_P001	Maize	plastid	16.85	28.77

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100191972	MapMan:18.4.5.2	MapMan:26.2.1.3	Gene3D:3.30.200.20	ProteinID:AQK64261.1
UniProt:B4FAU6	EMBL:BT034234	EMBL:BT054525	EMBL:BT061240	EMBL:EU676041	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0004674	GO:GO:0005488	GO:GO:0005524
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069
PIRSF:PIRSF000654	ScanProsite:PS00107	ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR24343	PANTHER:PTHR24343:SF162
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00220	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	UniParc:UPI00017B6175
EnsemblPlantsGene:Zm00001d013736	EnsemblPlants:Zm00001d013736_P001	EnsemblPlants:Zm00001d013736_T001	SEG:seg	:	:

Description

SnRK2 serine threonine kinase10Serine/threonine-protein kinase SRK2E

Coordinates

chr5:+:18918646..18921698

Molecular Weight (calculated)

40806.7 Da

IEP (calculated)

4.567

GRAVY (calculated)

-0.297

Length

362 amino acids

Sequence
(BLAST)

001: MDRAALTVGP GMDMPIMHDG DRYELVRDIG SGNFGVARLM RNRADGQLVA VKYIERGEKI DENVQREIIN HRSLRHPNII RFKEVILTPT HLAIVMEYAS
101: GGELFERICN AGRFSEDEAR FFFQQLISGV SYCHSMQVCH RDLKLENTLL DGSTAPRLKI CDFGYSKSSV LHSQPKSTVG TPAYIAPEVL LKKEYDGKVA
201: DVWSCGVTLY VMLVGAYPFE DPDEPKNFRK TIQRILGVQY SIPDYVHISP ECQNLVSRIF VADPATRITI PEIRNHPWFL KNLPADLMDD STMSKQYEEP
301: EQPMQSMDEI MQILAEATIP AAGPHGLNQF LNDGLDLDDD MDDLDSDTDL DLESSGEIVY AI

Best Arabidopsis Sequence Match ( AT4G33950.1 )
(BLAST)

001: MDRPAVSGPM DLPIMHDSDR YELVKDIGSG NFGVARLMRD KQSNELVAVK YIERGEKIDE NVKREIINHR SLRHPNIVRF KEVILTPTHL AIVMEYASGG
101: ELFERICNAG RFSEDEARFF FQQLISGVSY CHAMQVCHRD LKLENTLLDG SPAPRLKICD FGYSKSSVLH SQPKSTVGTP AYIAPEVLLK KEYDGKVADV
201: WSCGVTLYVM LVGAYPFEDP EEPKNFRKTI HRILNVQYAI PDYVHISPEC RHLISRIFVA DPAKRISIPE IRNHEWFLKN LPADLMNDNT MTTQFDESDQ
301: PGQSIEEIMQ IIAEATVPPA GTQNLNHYLT GSLDIDDDME EDLESDLDDL DIDSSGEIVY AM

Arabidopsis Description

SRK2ESerine/threonine-protein kinase SRK2E [Source:UniProtKB/Swiss-Prot;Acc:Q940H6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.