Factsheet for Zm00001d011604_P003

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 3
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d030045_P001
Zm00001d047037_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G66880.1	Zm00001d030045_P001	AT4G17870.1	19874541
AT5G66880.1	Zm00001d047037_P001	AT4G17870.1	19874541

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d024775_P002	Maize	cytosol	20.21	88.89
Zm00001d020262_P003	Maize	cytosol	12.63	82.19
Zm00001d013736_P001	Maize	cytosol	30.11	39.5
Zm00001d033339_P002	Maize	cytosol, extracellular	29.26	38.19
GSMUA_Achr4P28190_001	Banana	cytosol	28.21	36.91
GSMUA_Achr2P13360_001	Banana	cytosol	27.58	35.89
GSMUA_Achr4P23200_001	Banana	cytosol	26.74	34.6
KRH76942	Soybean	cytosol	21.47	33.77
Zm00001d003758_P001	Maize	extracellular, mitochondrion, plasma membrane	7.37	33.65
KRH28215	Soybean	cytosol, plastid, vacuole	8.42	33.06
CDY02082	Canola	cytosol	25.05	32.96
Bra012897.1-P	Field mustard	cytosol	25.05	32.96
Zm00001d013201_P003	Maize	cytosol	26.32	32.89
CDY23007	Canola	cytosol	24.84	32.69
VIT_07s0197g00080.t01	Wine grape	cytosol	24.84	32.69
CDY12785	Canola	cytosol	24.84	32.6
CDY01456	Canola	cytosol	24.84	32.6
KRH28516	Soybean	cytosol	24.63	32.59
KRH04679	Soybean	nucleus, plastid	24.63	32.5
AT5G66880.1	Thale cress	cytosol	24.63	32.41
Solyc02g090390.2.1	Tomato	cytosol	24.0	32.39
AT3G50500.2	Thale cress	cytosol	24.84	31.98
KRH57751	Soybean	nucleus	24.21	31.94
Bra012113.1-P	Field mustard	cytosol	24.0	31.93
Zm00001d034161_P003	Maize	cytosol	26.53	31.58
Zm00001d022179_P001	Maize	cytosol	20.21	27.83
Zm00001d047220_P003	Maize	cytosol	19.79	26.55
Zm00001d029975_P003	Maize	cytosol, extracellular	17.26	24.62
KRH76943	Soybean	cytosol, extracellular, plasma membrane	2.95	24.56
Zm00001d050723_P001	Maize	cytosol	18.32	23.9
Zm00001d003659_P002	Maize	extracellular, plasma membrane	17.89	23.88
Zm00001d016783_P001	Maize	cytosol	18.11	23.63
Zm00001d042188_P001	Maize	plastid	9.89	23.5
Zm00001d026690_P001	Maize	cytosol	17.47	22.86
Zm00001d038326_P003	Maize	cytosol	17.26	22.84
CDY52825	Canola	plasma membrane	8.0	22.75
Zm00001d012263_P002	Maize	cytosol	17.89	22.61
Zm00001d042695_P002	Maize	cytosol	18.11	21.94
Zm00001d047445_P001	Maize	plastid	7.16	16.04

Protein Annotations

Gene3D:1.10.510.10	MapMan:50.2.7	UniProt:A0A1D6G1X3	ProteinID:AQK97466.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:Kinase-like_dom_sf	PFAM:PF00069	PANTHER:PTHR24343	PANTHER:PTHR24343:SF203	InterPro:Prot_kinase_dom
SUPFAM:SSF56112	UniParc:UPI000844D198	EnsemblPlantsGene:Zm00001d011604	EnsemblPlants:Zm00001d011604_P003	EnsemblPlants:Zm00001d011604_T003	SEG:seg

Description

No Description!

Coordinates

chr8:+:155670824..155680910

Molecular Weight (calculated)

54876.8 Da

IEP (calculated)

4.784

GRAVY (calculated)

-0.328

Length

475 amino acids

Sequence
(BLAST)

001: MVWHLLSQIP NMLRRRLPHW NSCAPLAFLL PFNPQAFPGS IAQLGDVRRY LHIGNDRFRF SGDAWSGSRI NQNKCEISVK FERLLNFQIR PLPQHFLGFR
101: EGNCIFAQIF VVSNVHICSV CSCEILNETK ELQQITNDKQ KNQVVRIQHF TFIFAEDVNK QNRQAVHSTF TTDMFVFDNF GTLQHVGLKA QTMEMMYTII
201: ADEFKSMDNK DMRPEDYLNF FCLGNREEPP SNGSPESEKS TYKSAEIVCF CIFLILKEAF EDAEITHVDD TVDPDIEFMK KKLEDLDKPM KRRNDKLLKI
301: EHELCERIDP AQCRGDWRLN LEVLLKDVTL SQRTIVLYSQ PKSIVGTPAY IAHEVLLKKE YNGKVADVWS CGVMPYVMLT ITIPEIRNHP WFLKNLLADQ
401: MDDNTMSKQY EEPEQPMQSM NEFMQILVEA TIPAVGSRGL NQFLNDDIDL DDDMEDLDSD AGLDLESSGE IVYAI

Best Arabidopsis Sequence Match ( AT4G33950.1 )
(BLAST)

001: MDRPAVSGPM DLPIMHDSDR YELVKDIGSG NFGVARLMRD KQSNELVAVK YIERGEKIDE NVKREIINHR SLRHPNIVRF KEVILTPTHL AIVMEYASGG
101: ELFERICNAG RFSEDEARFF FQQLISGVSY CHAMQVCHRD LKLENTLLDG SPAPRLKICD FGYSKSSVLH SQPKSTVGTP AYIAPEVLLK KEYDGKVADV
201: WSCGVTLYVM LVGAYPFEDP EEPKNFRKTI HRILNVQYAI PDYVHISPEC RHLISRIFVA DPAKRISIPE IRNHEWFLKN LPADLMNDNT MTTQFDESDQ
301: PGQSIEEIMQ IIAEATVPPA GTQNLNHYLT GSLDIDDDME EDLESDLDDL DIDSSGEIVY AM

Arabidopsis Description

SRK2ESerine/threonine-protein kinase SRK2E [Source:UniProtKB/Swiss-Prot;Acc:Q940H6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.