Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
cytosol:
29344831
nucleus: 29344831 |
extracellular:
20408568
|
gfp PMID:
29344831
doi
Maize Research Institute, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China., Maize Research Institute, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China. aumdyms@sicau.edu.cn., Shanghai Center for Plant Stress Biology, and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China., Shanghai Center for Plant Stress Biology, and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China. zhaoyang@sibs.ac.cn.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU92088 | Sorghum | cytosol | 91.98 | 91.98 |
| Zm00001d047037_P001 | Maize | cytosol | 87.26 | 90.24 |
| TraesCS1A01G191700.1 | Wheat | cytosol | 83.49 | 83.89 |
| TraesCS1D01G195300.1 | Wheat | cytosol | 83.96 | 83.57 |
| TraesCS1B01G206600.1 | Wheat | cytosol, unclear | 83.49 | 83.1 |
| Os10t0573400-01 | Rice | plasma membrane | 79.25 | 79.25 |
| GSMUA_Achr4P19170_001 | Banana | cytosol | 63.68 | 69.59 |
| GSMUA_Achr8P14780_001 | Banana | cytosol | 62.74 | 64.56 |
| HORVU1Hr1G050110.1 | Barley | plastid | 83.02 | 64.23 |
| CDY70860 | Canola | cytosol | 52.36 | 59.68 |
| Bra012635.1-P | Field mustard | cytosol | 53.3 | 59.16 |
| CDX90440 | Canola | cytosol | 53.3 | 59.16 |
| CDY01498 | Canola | cytosol | 53.3 | 59.16 |
| Bra013262.1-P | Field mustard | cytosol | 52.83 | 58.64 |
| CDY69797 | Canola | cytosol | 52.83 | 58.64 |
| AT4G17870.1 | Thale cress | cytosol | 52.36 | 58.12 |
| KRH45453 | Soybean | cytosol | 56.13 | 56.13 |
| Solyc06g061180.1.1 | Tomato | nucleus | 56.13 | 55.87 |
| KRH74424 | Soybean | cytosol | 58.02 | 55.66 |
| KRH75621 | Soybean | cytosol | 56.13 | 55.61 |
| PGSC0003DMT400005378 | Potato | nucleus | 55.19 | 54.93 |
| CDX76554 | Canola | cytosol | 40.09 | 54.84 |
| Bra021032.1-P | Field mustard | cytosol | 40.57 | 54.78 |
| CDY58505 | Canola | nucleus | 54.25 | 54.76 |
| Bra024995.1-P | Field mustard | nucleus | 54.25 | 54.76 |
| Bra017526.1-P | Field mustard | nucleus | 47.17 | 54.64 |
| CDY03194 | Canola | nucleus | 49.06 | 54.45 |
| AT5G46790.1 | Thale cress | nucleus | 56.6 | 54.3 |
| CDY08877 | Canola | cytosol | 39.62 | 54.19 |
| CDX77691 | Canola | nucleus | 54.25 | 53.49 |
| CDY68316 | Canola | nucleus | 48.11 | 53.4 |
| Solyc08g076960.1.1 | Tomato | extracellular | 58.02 | 53.25 |
| Zm00001d016294_P001 | Maize | cytosol | 46.7 | 52.66 |
| PGSC0003DMT400045156 | Potato | nucleus | 57.08 | 52.38 |
| Zm00001d038436_P001 | Maize | plastid | 45.75 | 48.5 |
| KRH39536 | Soybean | plastid | 58.02 | 46.24 |
| VIT_02s0012g01270.t01 | Wine grape | cytosol | 55.66 | 44.7 |
| Zm00001d028793_P001 | Maize | cytosol, mitochondrion, plastid | 45.28 | 43.64 |
| Zm00001d010445_P001 | Maize | cytosol | 40.09 | 43.15 |
| Zm00001d037719_P001 | Maize | cytosol | 40.09 | 43.15 |
| Zm00001d047705_P001 | Maize | plastid | 44.34 | 43.12 |
| Zm00001d002533_P001 | Maize | cytosol | 25.47 | 42.86 |
| Zm00001d043014_P001 | Maize | cytosol | 42.92 | 42.72 |
| Zm00001d053396_P001 | Maize | cytosol | 37.74 | 36.87 |
| Zm00001d016105_P001 | Maize | cytosol | 36.79 | 36.79 |
| Zm00001d012475_P001 | Maize | cytosol | 41.51 | 28.21 |
| VIT_04s0008g00270.t01 | Wine grape | cytosol | 27.83 | 20.34 |
| VIT_08s0058g00230.t01 | Wine grape | plastid | 27.36 | 18.01 |
| VIT_13s0175g00110.t01 | Wine grape | plastid | 6.13 | 12.26 |
Protein Annotations
| EMBL:BT084463 | EnsemblPlants:Zm00001d030045_P001 | EnsemblPlants:Zm00001d030045_T001 | EnsemblPlantsGene:Zm00001d030045 | EntrezGene:100284319 | Gene3D:3.30.530.20 |
| InterPro:IPR023393 | InterPro:Polyketide_cyclase/dehydratase | InterPro:START-like_dom_sf | PANTHER:PTHR31213 | PANTHER:PTHR31213:SF6 | PFAM:PF10604 |
| ProteinID:ONM00076.1 | SEG:seg | SUPFAM:SSF55961 | UniParc:UPI0001A4BC7A | UniProt:C4J0W6 | MapMan:11.1.2.1.1.1 |
Description
Abscisic acid receptor PYR1
Coordinates
chr1:-:101898451..101899089
Molecular Weight (calculated)
22785.8 Da
IEP (calculated)
4.706
GRAVY (calculated)
-0.161
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQQGAGGDA EVPAGLGLTA AEYEQLRSTV DAHHRYAVGE GQCSSLLAQR IHAPPEAVWA VVRRFDCPQV YKHFIRSCAL RPDPEAGDAL CPGRLREVSV
101: ISGLPASTST ERLDLLDDAA RVFGFSITGG EHRLRNYRSV TTVSELADPA ICTVVLESYV VDVPDGNTED DTRLFADTVI RLNLQKLKSV AEANAAEAAA
201: TTNSVLLPRP AE
101: ISGLPASTST ERLDLLDDAA RVFGFSITGG EHRLRNYRSV TTVSELADPA ICTVVLESYV VDVPDGNTED DTRLFADTVI RLNLQKLKSV AEANAAEAAA
201: TTNSVLLPRP AE
001: MANSESSSSP VNEEENSQRI STLHHQTMPS DLTQDEFTQL SQSIAEFHTY QLGNGRCSSL LAQRIHAPPE TVWSVVRRFD RPQIYKHFIK SCNVSEDFEM
101: RVGCTRDVNV ISGLPANTSR ERLDLLDDDR RVTGFSITGG EHRLRNYKSV TTVHRFEKEE EEERIWTVVL ESYVVDVPEG NSEEDTRLFA DTVIRLNLQK
201: LASITEAMNR NNNNNNSSQV R
101: RVGCTRDVNV ISGLPANTSR ERLDLLDDDR RVTGFSITGG EHRLRNYKSV TTVHRFEKEE EEERIWTVVL ESYVVDVPEG NSEEDTRLFA DTVIRLNLQK
201: LASITEAMNR NNNNNNSSQV R
Arabidopsis Description
PYL1Abscisic acid receptor PYL1 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZS8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.