Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
cytosol:
29344831
nucleus: 29344831 |
gfp PMID:
29344831
doi
Maize Research Institute, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China., Maize Research Institute, Sichuan Agricultural University, Chengdu, 611130, Sichuan, China. aumdyms@sicau.edu.cn., Shanghai Center for Plant Stress Biology, and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China., Shanghai Center for Plant Stress Biology, and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, Shanghai, 200032, China. zhaoyang@sibs.ac.cn.
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG22422 | Sorghum | cytosol, nucleus, plastid | 91.89 | 89.47 |
| Zm00001d011131_P001 | Maize | cytosol | 63.78 | 83.69 |
| TraesCS1A01G358600.1 | Wheat | cytosol | 79.73 | 77.63 |
| TraesCS1B01G375100.1 | Wheat | cytosol | 78.92 | 76.64 |
| TraesCS1D01G363500.1 | Wheat | cytosol | 78.92 | 76.44 |
| HORVU1Hr1G080290.6 | Barley | cytosol | 78.38 | 75.52 |
| Zm00001d011132_P001 | Maize | cytosol, nucleus | 28.11 | 69.8 |
| PGSC0003DMT400021210 | Potato | cytosol, nucleus, peroxisome | 14.32 | 58.89 |
| Solyc08g062640.2.1 | Tomato | cytosol | 20.54 | 56.72 |
| Zm00001d039163_P002 | Maize | cytosol | 57.3 | 49.42 |
| Zm00001d009747_P001 | Maize | cytosol | 55.95 | 48.94 |
| CDX96761 | Canola | cytosol | 45.95 | 48.57 |
| CDX83901 | Canola | cytosol | 45.68 | 48.29 |
| Zm00001d011202_P002 | Maize | cytosol, peroxisome, plastid | 56.76 | 47.95 |
| Bra016595.1-P | Field mustard | cytosol | 51.62 | 46.59 |
| Zm00001d044301_P001 | Maize | cytosol, nucleus | 57.3 | 43.8 |
| Zm00001d005609_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 38.11 | 40.29 |
| Zm00001d009626_P001 | Maize | nucleus | 40.0 | 39.47 |
| Solyc12g096020.1.1 | Tomato | cytosol, nucleus, plastid | 53.24 | 38.78 |
| CDX72943 | Canola | cytosol, peroxisome, plastid | 49.46 | 38.53 |
| Zm00001d020100_P001 | Maize | mitochondrion, nucleus, peroxisome, plastid | 36.76 | 37.99 |
| CDX96432 | Canola | cytosol, peroxisome, plastid | 49.46 | 37.81 |
| Bra016034.1-P | Field mustard | cytosol, peroxisome, plastid | 49.46 | 37.81 |
| Zm00001d011495_P001 | Maize | cytosol | 39.73 | 37.31 |
| PGSC0003DMT400075333 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 53.78 | 37.13 |
| AT1G72770.1 | Thale cress | cytosol | 50.81 | 36.79 |
| CDY26234 | Canola | cytosol | 49.19 | 36.69 |
| VIT_09s0002g01850.t01 | Wine grape | cytosol, peroxisome, plastid | 54.05 | 36.5 |
| KRH61549 | Soybean | cytosol | 53.24 | 36.21 |
| KRH52222 | Soybean | cytosol | 52.97 | 36.03 |
| Bra025964.1-P | Field mustard | cytosol | 49.46 | 36.02 |
| PGSC0003DMT400006608 | Potato | plastid | 52.97 | 35.96 |
| AT1G17550.1 | Thale cress | cytosol | 49.46 | 35.81 |
| Zm00001d044015_P001 | Maize | cytosol | 39.46 | 35.61 |
| Zm00001d028574_P001 | Maize | nucleus | 38.11 | 35.61 |
| CDY48313 | Canola | cytosol | 48.11 | 35.53 |
| VIT_04s0008g01420.t01 | Wine grape | cytosol | 52.7 | 35.39 |
| KRH05300 | Soybean | cytosol | 52.43 | 34.77 |
| KRH15739 | Soybean | cytosol | 52.16 | 34.65 |
| Zm00001d042886_P001 | Maize | nucleus | 38.11 | 34.56 |
| Zm00001d012401_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 37.57 | 33.66 |
| Solyc08g062650.2.1 | Tomato | extracellular | 38.11 | 30.06 |
| Zm00001d025055_P001 | Maize | cytosol | 37.3 | 29.74 |
| Zm00001d004357_P001 | Maize | nucleus | 36.76 | 25.0 |
| Zm00001d007529_P001 | Maize | nucleus | 21.35 | 15.49 |
| Zm00001d007528_P001 | Maize | extracellular, vacuole | 6.49 | 9.45 |
| Zm00001d007558_P001 | Maize | cytosol | 0.54 | 1.77 |
| Zm00001d007530_P001 | Maize | cytosol | 0.54 | 1.15 |
| Zm00001d007532_P001 | Maize | cytosol | 0.27 | 1.14 |
| Zm00001d007533_P001 | Maize | extracellular | 0.27 | 0.94 |
| Zm00001d007554_P001 | Maize | cytosol | 0.54 | 0.83 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | EntrezGene:100381549 | MapMan:11.1.2.1.1.2 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 |
| UniProt:A0A075T8K1 | ProteinID:AQK88044.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004721 | GO:GO:0004722 |
| GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 | GO:GO:0046872 | InterPro:IPR001932 | InterPro:IPR036457 |
| EMBL:KJ855131 | PFAM:PF00481 | InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom |
| ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF517 | SMART:SM00331 | SMART:SM00332 |
| SUPFAM:SSF81606 | UniParc:UPI0002218BC3 | EnsemblPlantsGene:Zm00001d038846 | EnsemblPlants:Zm00001d038846_P001 | EnsemblPlants:Zm00001d038846_T001 | SEG:seg |
Description
protein phosphatase homolog12Protein phosphatase 2C 16
Coordinates
chr6:-:165730468..165734191
Molecular Weight (calculated)
39718.2 Da
IEP (calculated)
5.083
GRAVY (calculated)
-0.177
Length
370 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAMCVDDE AASAAAESAG VDKLDLGAAA GGKRSVYLMD CAPVWGCAST RGRSAEMEDA CAAAPRFADV PVRLLASRRD LDGLGLDAGA LRLPAHLFGV
101: FDGHGGAEVA NYCRERLQVL LRQELRLLGE DLGQISCDVD MKEHWDELFT GCFQRLDDEV SGQASRLVGA VQESRPVAAE NVGSTAVVAV VCSSHVVVAN
201: CGDSRAVLCR GKEPVELSID HKPDRKDERA RIEALGGKVI QWNGYRVSGI LAMSRSIGDR YLKPFVIPKP EVTVVPRAKD DDCLILASDG LWDVVSNEEA
301: CKAARRQIQL WHKNNGVTSS LCDEGDESND PAAQAAADYL MRLALKKGTE DNITVIVVDL KPRKKAKSNS
101: FDGHGGAEVA NYCRERLQVL LRQELRLLGE DLGQISCDVD MKEHWDELFT GCFQRLDDEV SGQASRLVGA VQESRPVAAE NVGSTAVVAV VCSSHVVVAN
201: CGDSRAVLCR GKEPVELSID HKPDRKDERA RIEALGGKVI QWNGYRVSGI LAMSRSIGDR YLKPFVIPKP EVTVVPRAKD DDCLILASDG LWDVVSNEEA
301: CKAARRQIQL WHKNNGVTSS LCDEGDESND PAAQAAADYL MRLALKKGTE DNITVIVVDL KPRKKAKSNS
001: MEEISPAVAL TLGLANTMCD SGISSTFDIS ELENVTDAAD MLCNQKRQRY SNGVVDCIMG SVSEEKTLSE VRSLSSDFSV TVQESEEDEP LVSDATIISE
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S
Arabidopsis Description
HAB2Protein phosphatase 2C 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNP9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.