CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	nucleus
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
EER88529
EER92405
EES04686
EES04864
EES06532
EES17886
EES19683
KXG33203
KXG34371
KXG37877
OQU87775
OQU92088

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G72770.1	EES04864	AT1G01360.1	19407142
AT1G72770.1	EES17886	AT1G01360.1	19407142
AT1G72770.1	EES04864	AT1G01360.1	19407143
AT1G72770.1	EES17886	AT1G01360.1	19407143
AT1G72770.1	EER88529	AT1G73000.1	19407142
AT1G72770.1	EES06532	AT1G73000.1	19407142
AT1G72770.1	EER88529	AT2G26040.1	19407142
AT1G72770.1	EES06532	AT2G26040.1	19407142
AT1G72770.1	KXG34371	AT2G30880.1	21798944
AT1G72770.1	KXG37877	AT2G30880.1	21798944
AT1G72770.1	EES04686	AT2G33610.1	19033529
AT1G72770.1	EER92405	AT2G38310.1	19407142
AT1G72770.1	EES19683	AT2G38310.1	19407142
AT1G72770.1	OQU87775	AT2G38310.1	19407142
AT1G72770.1	EER92405	AT2G38310.1	19624469
AT1G72770.1	EES19683	AT2G38310.1	19624469
AT1G72770.1	OQU87775	AT2G38310.1	19624469
AT1G72770.1	EER92405	AT2G40330.1	19407142
AT1G72770.1	EES19683	AT2G40330.1	19407142
AT1G72770.1	OQU87775	AT2G40330.1	19407142
AT1G72770.1	EER92405	AT2G40330.1	19624469
AT1G72770.1	EES19683	AT2G40330.1	19624469
AT1G72770.1	OQU87775	AT2G40330.1	19624469
AT1G72770.1	EER92405	AT2G40330.1	21847091
AT1G72770.1	EES19683	AT2G40330.1	21847091
AT1G72770.1	OQU87775	AT2G40330.1	21847091
AT1G72770.1	EES04864	AT4G01026.1	19407142
AT1G72770.1	EES17886	AT4G01026.1	19407142
AT1G72770.1	OQU92088	AT4G17870.1	19407142
AT1G72770.1	OQU92088	AT4G17870.1	19624469
AT1G72770.1	OQU92088	AT4G17870.1	21847091
AT1G72770.1	EES04864	AT4G27920.1	19407142
AT1G72770.1	EES17886	AT4G27920.1	19407142
AT1G72770.1	EER92405	AT5G05440.1	19407142
AT1G72770.1	EES19683	AT5G05440.1	19407142
AT1G72770.1	OQU87775	AT5G05440.1	19407142
AT1G72770.1	EER92405	AT5G05440.1	19624469
AT1G72770.1	EES19683	AT5G05440.1	19624469
AT1G72770.1	OQU87775	AT5G05440.1	19624469
AT1G72770.1	EER92405	AT5G05440.1	21847091
AT1G72770.1	EES19683	AT5G05440.1	21847091
AT1G72770.1	OQU87775	AT5G05440.1	21847091
AT1G72770.1	OQU92088	AT5G46790.1	19407142
AT1G72770.1	KXG33203	AT5G66400.1	19033529

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038846_P001	Maize	cytosol, nucleus	89.47	91.89
TraesCS1A01G358600.1	Wheat	cytosol	78.95	78.95
TraesCS1B01G375100.1	Wheat	cytosol	78.16	77.95
TraesCS1D01G363500.1	Wheat	cytosol	77.89	77.49
HORVU1Hr1G080290.6	Barley	cytosol	77.63	76.82
Os05t0537400-00	Rice	cytosol	57.37	73.65
Zm00001d011132_P001	Maize	cytosol, nucleus	27.11	69.13
OQU87413	Sorghum	cytosol	61.32	60.84
PGSC0003DMT400021210	Potato	cytosol, nucleus, peroxisome	13.95	58.89
Solyc08g062640.2.1	Tomato	cytosol	20.26	57.46
CDX96761	Canola	cytosol	44.74	48.57
CDX83901	Canola	cytosol	44.21	48.0
KXG22681	Sorghum	cytosol	53.68	47.66
KXG35986	Sorghum	cytosol, peroxisome, plastid	24.74	46.31
Bra016595.1-P	Field mustard	cytosol	49.47	45.85
EES00964	Sorghum	peroxisome, plasma membrane, vacuole	55.79	43.98
CDX72943	Canola	cytosol, peroxisome, plastid	49.74	39.79
EER96576	Sorghum	cytosol	37.37	39.78
CDX96432	Canola	cytosol, peroxisome, plastid	49.74	39.05
Bra016034.1-P	Field mustard	cytosol, peroxisome, plastid	49.74	39.05
Solyc12g096020.1.1	Tomato	cytosol, nucleus, plastid	51.58	38.58
AT1G72770.1	Thale cress	cytosol	50.26	37.38
PGSC0003DMT400075333	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole	52.11	36.94
VIT_09s0002g01850.t01	Wine grape	cytosol, peroxisome, plastid	53.16	36.86
OQU78453	Sorghum	nucleus	38.16	36.71
PGSC0003DMT400006608	Potato	plastid	52.63	36.7
CDY26234	Canola	cytosol	47.89	36.69
KRH61549	Soybean	cytosol	51.58	36.03
Bra025964.1-P	Field mustard	cytosol	48.16	36.02
VIT_04s0008g01420.t01	Wine grape	cytosol	52.11	35.93
CDY48313	Canola	cytosol	47.37	35.93
KRH52222	Soybean	cytosol	51.32	35.85
AT1G17550.1	Thale cress	cytosol	48.16	35.81
KRH05300	Soybean	cytosol	51.05	34.77
EER92493	Sorghum	nucleus	36.58	34.66
KRH15739	Soybean	cytosol	50.53	34.47
EES01744	Sorghum	plastid	37.11	34.22
KXG33023	Sorghum	nucleus	38.16	30.59
Solyc08g062650.2.1	Tomato	extracellular	36.58	29.64
EES11811	Sorghum	plastid	37.63	29.24
KXG22152	Sorghum	nucleus	35.53	29.09
OQU90183	Sorghum	mitochondrion	16.58	22.18
OQU86100	Sorghum	nucleus	17.37	16.54
KXG28797	Sorghum	golgi, plasma membrane, vacuole	24.21	8.62

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	MapMan:11.1.2.1.1.2	MapMan:18.4.24.2.1	Gene3D:3.60.40.10	UniProt:A0A1B6P9T6
GO:GO:0003674	GO:GO:0003824	GO:GO:0004721	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464
GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0043169	GO:GO:0046872	InterPro:IPR001932	InterPro:IPR036457	EnsemblPlants:KXG22422	ProteinID:KXG22422
ProteinID:KXG22422.1	PFAM:PF00481	InterPro:PP2C	InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF517	SMART:SM00331	SMART:SM00332
EnsemblPlantsGene:SORBI_3009G213000	SUPFAM:SSF81606	UniParc:UPI00081ACE98	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:-:55860681..55863451

Molecular Weight (calculated)

41001.9 Da

IEP (calculated)

5.364

GRAVY (calculated)

-0.191

Length

380 amino acids

Sequence
(BLAST)

001: MAATAAICVE DEATCAAAEC APGVEKLDLA AAGAGADGKA GGGKRSVYLM DCAPVWGCAS TRGRSAEMED ACAAFPRFAD VPVRLLARRR DLDGLGLDAD
101: ALRLPAHLFG VFDGHGGAEV ANYCRERLQV LLRQELRLLG KDLGETSEVE MKEHWDDLFT RCFQRLDDEV SGQASRLVGG VQESRPVAAE NVGSTAVVAV
201: VCSSHVVVAN CGDSRVVLCR GKEPVELSID HKPDRKDERA RIEALGGKVI QWNGYRVSGI LAMSRSIGDR YLKPFVIPKP EVTVFPRAKD DDCLILASDG
301: LWDVIPNEEA CKVARRQIQL WHKNNGVASS LCDEGDESTD PAAQAAADYL MRLALKKGTE DNITVIVVDL KPRKKLKSNS

Best Arabidopsis Sequence Match ( AT1G72770.3 )
(BLAST)

001: MEEMTPAVAM TLSLAANTMC ESSPVEITQL KNVTDAADLL SDSENQSFCN GGTECTMEDV SELEEVGEQD LLKTLSDTRS GSSNVFDEDD VLSVVEDNSA
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T

Arabidopsis Description

HAB1Protein phosphatase 2C 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.