CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 5
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG35986	Sorghum	cytosol, peroxisome, plastid	19.01	26.6
EER96576	Sorghum	cytosol	32.04	25.49
EER92493	Sorghum	nucleus	27.46	19.45
EES01744	Sorghum	plastid	25.7	17.72
KXG22422	Sorghum	cytosol, nucleus, plastid	22.18	16.58
OQU78453	Sorghum	nucleus	22.89	16.46
OQU87413	Sorghum	cytosol	21.48	15.93
KXG22681	Sorghum	cytosol	23.59	15.65
KXG22152	Sorghum	nucleus	24.65	15.09
EES11811	Sorghum	plastid	24.3	14.11
KXG33023	Sorghum	nucleus	22.89	13.71
EES00964	Sorghum	peroxisome, plasma membrane, vacuole	21.48	12.66
Os04t0167900-00	Rice	cytosol	9.15	12.15
OQU86100	Sorghum	nucleus	15.14	10.78
KXG28797	Sorghum	golgi, plasma membrane, vacuole	17.96	4.78
Zm00001d007558_P001	Maize	cytosol	0.35	0.88

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	UniProt:A0A1W0W762	GO:GO:0003674
GO:GO:0003824	GO:GO:0004722	GO:GO:0005488	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0043169	InterPro:IPR001932
InterPro:IPR036457	EnsemblPlants:OQU90183	ProteinID:OQU90183	ProteinID:OQU90183.1	PFAM:PF00481	InterPro:PP2C
InterPro:PP2C_BS	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	ScanProsite:PS01032	PFscan:PS51746	PANTHER:PTHR13832
PANTHER:PTHR13832:SF334	EnsemblPlantsGene:SORBI_3002G360701	SUPFAM:SSF81606	UniParc:UPI0001A83C38	RefSeq:XP_002463114.1	SEG:seg

Description

hypothetical protein

Coordinates

chr2:-:72268915..72269770

Molecular Weight (calculated)

30452.6 Da

IEP (calculated)

5.709

GRAVY (calculated)

-0.371

Length

284 amino acids

Sequence
(BLAST)

001: MGTHQALGPR RSGAPISGDA AVDLGAAGAR ARKPSSIRWL EPHLSPAVVE GHAPGEDEKY LGCQMSSHGV FDGHGCSHVA EACRDRIHEL LAEELAVAAA
101: DVSWTAAMER SFARMDTRGD AAPDAATRKR SLEAGELLVA RKHGAASVAG RRREMEDIVS VREAFALAEG SHGGRRDFYG VFDGHGCSHV AEACRDRMHE
201: LLAEELAVAA DDVSWTAAME HSFARMDSER GCGVDRMHEL LAEELAVAAD DVSWTAAMER SFARMDSERG CGVGEGMRRG RNGF

Best Arabidopsis Sequence Match ( AT3G11410.1 )
(BLAST)

001: MAGICCGVVG ETEPAAPVDS TSRASLRRRL DLLPSIKIVA DSAVAPPLEN CRKRQKRETV VLSTLPGNLD LDSNVRSENK KARSAVTNSN SVTEAESFFS
101: DVPKIGTTSV CGRRRDMEDA VSIHPSFLQR NSENHHFYGV FDGHGCSHVA EKCRERLHDI VKKEVEVMAS DEWTETMVKS FQKMDKEVSQ RECNLVVNGA
201: TRSMKNSCRC ELQSPQCDAV GSTAVVSVVT PEKIIVSNCG DSRAVLCRNG VAIPLSVDHK PDRPDELIRI QQAGGRVIYW DGARVLGVLA MSRAIGDNYL
301: KPYVIPDPEV TVTDRTDEDE CLILASDGLW DVVPNETACG VARMCLRGAG AGDDSDAAHN ACSDAALLLT KLALARQSSD NVSVVVVDLR KRRNNQASS

Arabidopsis Description

PP2CAProtein phosphatase 2C 37 [Source:UniProtKB/Swiss-Prot;Acc:P49598]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.