CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G171000.1	Wheat	cytosol, nucleus, peroxisome	19.3	23.99
TraesCS3B01G170900.1	Wheat	peroxisome	18.8	23.89
TraesCS3D01G153000.1	Wheat	peroxisome	18.3	23.86
TraesCS3B01G171100.1	Wheat	peroxisome	20.55	23.36
TraesCS3A01G144400.1	Wheat	peroxisome	17.54	22.88
TraesCS3D01G153200.1	Wheat	nucleus, peroxisome, plastid	20.05	22.79
Os04t0167900-00	Rice	cytosol	10.78	20.09
EER96576	Sorghum	cytosol	17.29	19.33
KXG35986	Sorghum	cytosol, peroxisome, plastid	9.77	19.21
OQU78453	Sorghum	nucleus	18.55	18.73
KXG22422	Sorghum	cytosol, nucleus, plastid	16.54	17.37
EES01744	Sorghum	plastid	16.79	16.26
EER92493	Sorghum	nucleus	16.29	16.21
OQU87413	Sorghum	cytosol	15.54	16.19
KXG33023	Sorghum	nucleus	18.05	15.19
OQU90183	Sorghum	mitochondrion	10.78	15.14
KXG22152	Sorghum	nucleus	17.54	15.09
KXG22681	Sorghum	cytosol	15.54	14.49
EES11811	Sorghum	plastid	17.04	13.91
EES00964	Sorghum	peroxisome, plasma membrane, vacuole	16.79	13.9
KXG28797	Sorghum	golgi, plasma membrane, vacuole	14.04	5.25
Zm00001d007532_P001	Maize	cytosol	0.25	1.14

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.2	UniProt:A0A1W0VVF0	GO:GO:0003674
GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	EnsemblPlants:OQU86100
ProteinID:OQU86100	ProteinID:OQU86100.1	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	SMART:SM00332
EnsemblPlantsGene:SORBI_3003G015950	SUPFAM:SSF81606	UniParc:UPI0009DC821A	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:1447400..1448967

Molecular Weight (calculated)

42649.5 Da

IEP (calculated)

7.720

GRAVY (calculated)

-0.376

Length

399 amino acids

Sequence
(BLAST)

001: MSGSSDNAVP ITEEEMMAAM MQEALAWGTP PRLYLSYGMV AMKGMPPVLT DAVEAAPSFT LLTPPVGLDF FAVLDGRGLG AAAAAASGEE ESERLVALLR
101: DALATQVYLK LMCSDSPRLF LDGMSYNGWW ATTLREAFRV FHEACSQGEH GVDAPAATAI VALVHEKYLV IGNHGASKAV LSRDGELVEL SSDSQSLHMV
201: NFVIQVQAGH RCVGELSAGA GIGSRRRRRR RGGGGTGGAR RVSDPGERRA LGQGGAGCGV RARPAEIGED LADHHAVGDA HHRHGRHADA ARKRARQEGG
301: ARRQPGQHQR RHRHLQGLLG YPAHAGCHCQ QGSKCVSTLN PQASLNHEGP SVIQDPVAQT ATEEAAGVHS SDLHKWPVRG ARVADSRSTL REMREEWTT

Best Arabidopsis Sequence Match ( AT2G29380.1 )
(BLAST)

001: MAEICYEVVT DACPSSVYES TPAHSRRRPR FQTVMHEDWE KNCKRSKQEA LATRYSSIPR SSREDFSDQN VDVSSPRYGV SSVCGRRREM EDAVAIHPSF
101: SSPKNSEFPQ HYFGVYDGHG CSHVAARCRE RLHKLVQEEL SSDMEDEEEW KTTMERSFTR MDKEVVSWGD SVVTANCKCD LQTPACDSVG STAVVSVITP
201: DKIVVANCGD SRAVLCRNGK PVPLSTDHKP DRPDELDRIE GAGGRVIYWD CPRVLGVLAM SRAIGDNYLK PYVSCEPEVT ITDRRDDDCL ILASDGLWDV
301: VSNETACSVA RMCLRGGGRR QDNEDPAISD KACTEASVLL TKLALARNSS DNVSVVVIDL RR

Arabidopsis Description

HAI3HAI3 [Source:UniProtKB/TrEMBL;Acc:A0A178VWK9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.