Factsheet for TraesCS3B01G170900.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome, plastid
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G153000.1	Wheat	peroxisome	85.99	88.24
TraesCS3A01G144400.1	Wheat	peroxisome	84.08	86.27
TraesCS3B01G171000.1	Wheat	cytosol, nucleus, peroxisome	73.89	72.27
TraesCS3B01G171100.1	Wheat	peroxisome	46.5	41.6
TraesCS1B01G441400.1	Wheat	cytosol	29.94	24.48
TraesCS5B01G182000.1	Wheat	peroxisome	25.16	22.64
TraesCS4B01G210100.1	Wheat	nucleus	28.66	22.17
TraesCS3B01G266200.1	Wheat	nucleus, peroxisome, plastid	28.66	21.74
TraesCS1B01G375100.1	Wheat	cytosol	25.8	21.26
TraesCS3B01G277900.1	Wheat	cytosol	27.71	20.86
TraesCS3B01G394600.3	Wheat	plastid	26.11	19.16
OQU86100	Sorghum	nucleus	23.89	18.8
Os04t0167900-00	Rice	cytosol	12.1	17.76
TraesCS3B01G240000.1	Wheat	peroxisome, plasma membrane, vacuole	27.07	17.75
TraesCS2B01G023600.1	Wheat	cytosol	25.48	17.39
TraesCS1B01G475700.1	Wheat	cytosol	24.2	17.08
TraesCS7B01G297000.2	Wheat	plasma membrane	17.52	5.15
Zm00001d007532_P001	Maize	cytosol	0.0	0.0

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	PFAM:PF00481	InterPro:PP2C
InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom	PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF527	SMART:SM00332
SUPFAM:SSF81606	EnsemblPlantsGene:TraesCS3B01G170900	EnsemblPlants:TraesCS3B01G170900.1	TIGR:cd00143	SEG:seg	:

Description

No Description!

Coordinates

chr3B:-:171796620..171799493

Molecular Weight (calculated)

34325.8 Da

IEP (calculated)

9.519

GRAVY (calculated)

-0.022

Length

314 amino acids

Sequence
(BLAST)

001: MSMDIDVNDV AEEEVPTWGK CPQMYLSYGT ATRNDRLPML KDAVAAVKSF TVLSPPMGLD FFGVFDGILG AMYAKHMGER LHVVVAEKIK RDLLAQAPRA
101: QNDVEGWWKT VIVDAVRVVD KEVLIGGGSG IDAPARVGSG ALVVLVLEDY FVLANRGASR AVIYRGYEAV PLTPEHAPMP QNGGGDVVGS TSRLEAIMRR
201: HAFRSSKSRA TVRRLAVPDP EVVAVKRKPG DKFLILATRG LWDVVAPSDA CAFIERRLSV PRIIREWDKK PTNNSGPPYA KALANELAAH AISKGTKCNV
301: NIILILLKNF WDLP

Best Arabidopsis Sequence Match ( AT1G17550.1 )
(BLAST)

001: MEEISPAVAL TLGLANTMCD SGISSTFDIS ELENVTDAAD MLCNQKRQRY SNGVVDCIMG SVSEEKTLSE VRSLSSDFSV TVQESEEDEP LVSDATIISE
101: GLIVVDARSE ISLPDTVETD NGRVLATAII LNETTIEQVP TAEVLIASLN HDVNMEVATS EVVIRLPEEN PNVARGSRSV YELECIPLWG TISICGGRSE
201: MEDAVRALPH FLKIPIKMLM GDHEGMSPSL PYLTSHFFGV YDGHGGAQVA DYCHDRIHSA LAEEIERIKE ELCRRNTGEG RQVQWEKVFV DCYLKVDDEV
301: KGKINRPVVG SSDRMVLEAV SPETVGSTAV VALVCSSHII VSNCGDSRAV LLRGKDSMPL SVDHKPDRED EYARIEKAGG KVIQWQGARV SGVLAMSRSI
401: GDQYLEPFVI PDPEVTFMPR AREDECLILA SDGLWDVMSN QEACDFARRR ILAWHKKNGA LPLAERGVGE DQACQAAAEY LSKLAIQMGS KDNISIIVID
501: LKAQRKFKTR S

Arabidopsis Description

HAB2Protein phosphatase 2C 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNP9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.