Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G362200.1 | Wheat | nucleus, plastid | 89.49 | 97.95 |
| TraesCS3D01G355900.1 | Wheat | plastid | 89.95 | 96.98 |
| HORVU3Hr1G085930.3 | Barley | nucleus, plastid | 88.32 | 96.18 |
| EES01744 | Sorghum | plastid | 71.73 | 74.51 |
| Zm00001d042886_P001 | Maize | nucleus | 70.33 | 73.77 |
| Zm00001d012401_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 70.09 | 72.64 |
| Os01t0846300-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 68.69 | 71.01 |
| GSMUA_AchrUn_... | Banana | cytosol | 43.69 | 66.08 |
| GSMUA_Achr6P15180_001 | Banana | cytosol | 51.87 | 60.0 |
| CDY18067 | Canola | cytosol | 8.18 | 59.32 |
| TraesCS5B01G182000.1 | Wheat | peroxisome | 47.43 | 58.17 |
| CDY67257 | Canola | nucleus | 46.96 | 54.18 |
| CDY67227 | Canola | cytosol | 46.73 | 53.91 |
| Bra002038.1-P | Field mustard | nucleus | 46.73 | 52.63 |
| AT2G29380.1 | Thale cress | nucleus | 44.39 | 52.49 |
| TraesCS4B01G210100.1 | Wheat | nucleus | 49.77 | 52.46 |
| VIT_06s0004g05460.t01 | Wine grape | nucleus | 46.96 | 51.15 |
| KRH15068 | Soybean | cytosol | 47.66 | 51.0 |
| AT3G11410.1 | Thale cress | cytosol | 47.43 | 50.88 |
| Solyc05g052980.2.1 | Tomato | nucleus | 48.6 | 50.86 |
| KRG97855 | Soybean | cytosol | 46.96 | 50.25 |
| CDY01017 | Canola | nucleus | 46.03 | 50.13 |
| KRH73067 | Soybean | cytosol | 47.66 | 50.12 |
| Bra018398.1-P | Field mustard | cytosol | 42.76 | 50.0 |
| CDY40181 | Canola | cytosol | 42.76 | 50.0 |
| VIT_13s0019g02200.t01 | Wine grape | plastid | 46.73 | 50.0 |
| KRH31027 | Soybean | cytosol | 46.73 | 49.88 |
| CDY08530 | Canola | nucleus | 45.79 | 49.87 |
| CDY45436 | Canola | cytosol | 42.52 | 49.73 |
| Solyc03g096670.2.1 | Tomato | nucleus | 46.96 | 49.51 |
| Bra034845.1-P | Field mustard | nucleus | 46.03 | 49.37 |
| PGSC0003DMT400069947 | Potato | cytosol | 48.13 | 49.28 |
| CDY06705 | Canola | nucleus | 44.16 | 48.46 |
| PGSC0003DMT400043146 | Potato | nucleus | 46.26 | 48.29 |
| PGSC0003DMT400077989 | Potato | cytosol | 45.56 | 47.56 |
| Bra002594.1-P | Field mustard | plastid | 45.09 | 46.84 |
| Solyc06g076400.2.1 | Tomato | nucleus | 44.86 | 46.83 |
| AT5G59220.1 | Thale cress | nucleus | 44.86 | 46.49 |
| CDX80307 | Canola | nucleus, plastid | 42.76 | 46.21 |
| CDY33008 | Canola | nucleus, plastid | 42.52 | 46.08 |
| KRH73525 | Soybean | cytosol, mitochondrion, peroxisome, plastid | 11.21 | 45.28 |
| CDY10275 | Canola | nucleus | 45.33 | 45.12 |
| Bra015579.1-P | Field mustard | nucleus | 44.86 | 45.07 |
| AT1G07430.1 | Thale cress | nucleus | 45.56 | 44.12 |
| Bra031574.1-P | Field mustard | nucleus | 44.39 | 43.58 |
| TraesCS1B01G441400.1 | Wheat | cytosol | 39.02 | 43.49 |
| CDY06259 | Canola | nucleus | 44.16 | 43.35 |
| TraesCS3B01G266200.1 | Wheat | nucleus, peroxisome, plastid | 39.72 | 41.06 |
| Bra030455.1-P | Field mustard | cytosol | 14.95 | 40.25 |
| TraesCS1B01G375100.1 | Wheat | cytosol | 32.71 | 36.75 |
| TraesCS2B01G023600.1 | Wheat | cytosol | 39.02 | 36.3 |
| CDY36606 | Canola | nucleus | 19.86 | 34.0 |
| TraesCS1B01G475700.1 | Wheat | cytosol | 33.41 | 32.13 |
| TraesCS3B01G277900.1 | Wheat | cytosol | 31.07 | 31.89 |
| TraesCS3B01G240000.1 | Wheat | peroxisome, plasma membrane, vacuole | 34.11 | 30.48 |
| TraesCS3B01G171100.1 | Wheat | peroxisome | 23.83 | 29.06 |
| TraesCS3B01G170900.1 | Wheat | peroxisome | 19.16 | 26.11 |
| TraesCS3B01G171000.1 | Wheat | cytosol, nucleus, peroxisome | 19.39 | 25.86 |
| PGSC0003DMT400049695 | Potato | extracellular | 3.5 | 13.64 |
| TraesCS7B01G297000.2 | Wheat | plasma membrane | 22.2 | 8.9 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004722 |
| GO:GO:0005488 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0043169 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 |
| InterPro:PP2C | InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 | PFscan:PS51746 |
| PANTHER:PTHR13832 | PANTHER:PTHR13832:SF532 | SMART:SM00332 | SUPFAM:SSF81606 | EnsemblPlantsGene:TraesCS3B01G394600 | EnsemblPlants:TraesCS3B01G394600.3 |
| TIGR:cd00143 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr3B:+:621936622..621938081
Molecular Weight (calculated)
45559.5 Da
IEP (calculated)
6.195
GRAVY (calculated)
-0.293
Length
428 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEICCQEAK SPPATAATVA TVSASAAAAA VASSVMDRRR RRLELKRFRL ASDLEQSAAE YAGARKRPRI PRTVSGPCPD AASASENTER YPRFGFSSVC
101: GRRREMEDAV SIRPGFLPGS GKSHFFGVFD GHGCSHVATT CQELMHEAVA EEHEKAGPGE EPTWKEVMER SFARLDERAA NWATTRSSEE PACRCEQKMP
201: SRCDHVGSTA VVAVVSPTQL VVANAGDSRA VLSRAGVPVA LSVDHKPDRP DELERIQAAG GRVIYWDGAR VLGVLAMSRA IGEFSSSNFA LVRSFALPPG
301: SRSEPNLTCT RAGDGYLKPF VTAEPEVTVT ERSDADECLI LASDGLWDVV TNEMACDVAR ACFRSNGPPE PATAQAQPSG EAKASEGVSK AESDRACSDA
401: AMLLAKLALA RGSSDNVSVV VVDLRRGS
101: GRRREMEDAV SIRPGFLPGS GKSHFFGVFD GHGCSHVATT CQELMHEAVA EEHEKAGPGE EPTWKEVMER SFARLDERAA NWATTRSSEE PACRCEQKMP
201: SRCDHVGSTA VVAVVSPTQL VVANAGDSRA VLSRAGVPVA LSVDHKPDRP DELERIQAAG GRVIYWDGAR VLGVLAMSRA IGEFSSSNFA LVRSFALPPG
301: SRSEPNLTCT RAGDGYLKPF VTAEPEVTVT ERSDADECLI LASDGLWDVV TNEMACDVAR ACFRSNGPPE PATAQAQPSG EAKASEGVSK AESDRACSDA
401: AMLLAKLALA RGSSDNVSVV VVDLRRGS
001: MADICYEDET SACESRPLWS SRKWRIGVQR FRMSPSEMNP TASTTEEEDK SEGIYNKRNK QEEYDFMNCA SSSPSQSSPE EESVSLEDSD VSISDGNSSV
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA
Arabidopsis Description
AIP1Protein phosphatase 2C 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.