Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G441200.1 | Wheat | cytosol | 89.21 | 96.36 |
| TraesCS1D01G449700.1 | Wheat | cytosol | 88.54 | 96.1 |
| HORVU1Hr1G094840.9 | Barley | extracellular, mitochondrion | 84.49 | 89.95 |
| PGSC0003DMT400021210 | Potato | cytosol, nucleus, peroxisome | 13.93 | 68.89 |
| Os05t0592800-02 | Rice | endoplasmic reticulum, vacuole | 68.31 | 68.31 |
| Zm00001d009747_P001 | Maize | cytosol | 64.49 | 67.85 |
| KXG22681 | Sorghum | cytosol | 64.72 | 67.29 |
| Solyc08g062640.2.1 | Tomato | cytosol | 20.22 | 67.16 |
| Zm00001d039163_P002 | Maize | cytosol | 63.6 | 65.97 |
| TraesCS3B01G240000.1 | Wheat | peroxisome, plasma membrane, vacuole | 64.04 | 59.5 |
| GSMUA_Achr7P24000_001 | Banana | cytosol | 51.24 | 58.16 |
| GSMUA_Achr8P05700_001 | Banana | cytosol, peroxisome, plasma membrane | 53.48 | 54.59 |
| TraesCS1B01G375100.1 | Wheat | cytosol | 43.6 | 50.92 |
| CDX96761 | Canola | cytosol | 39.33 | 50.0 |
| CDX83901 | Canola | cytosol | 37.98 | 48.29 |
| Bra016595.1-P | Field mustard | cytosol | 44.04 | 47.8 |
| GSMUA_Achr3P26270_001 | Banana | cytosol, peroxisome, plastid | 52.36 | 46.98 |
| TraesCS3B01G277900.1 | Wheat | cytosol | 43.15 | 46.04 |
| CDX72943 | Canola | cytosol, peroxisome, plastid | 46.52 | 43.58 |
| Solyc12g096020.1.1 | Tomato | cytosol, nucleus, plastid | 49.21 | 43.11 |
| CDX96432 | Canola | cytosol, peroxisome, plastid | 46.52 | 42.77 |
| Bra016034.1-P | Field mustard | cytosol, peroxisome, plastid | 46.52 | 42.77 |
| PGSC0003DMT400075333 | Potato | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, plastid, vacuole | 49.89 | 41.42 |
| VIT_04s0008g01420.t01 | Wine grape | cytosol | 51.24 | 41.38 |
| KRH61549 | Soybean | cytosol | 50.56 | 41.36 |
| KRH52222 | Soybean | cytosol | 50.56 | 41.36 |
| AT1G72770.1 | Thale cress | cytosol | 47.19 | 41.1 |
| CDY26234 | Canola | cytosol | 45.62 | 40.93 |
| VIT_09s0002g01850.t01 | Wine grape | cytosol, peroxisome, plastid | 50.11 | 40.69 |
| PGSC0003DMT400006608 | Potato | plastid | 49.21 | 40.18 |
| KRH05300 | Soybean | cytosol | 49.89 | 39.78 |
| Bra025964.1-P | Field mustard | cytosol | 45.39 | 39.76 |
| CDY48313 | Canola | cytosol | 44.72 | 39.72 |
| KRH15739 | Soybean | cytosol | 49.66 | 39.68 |
| TraesCS5B01G182000.1 | Wheat | peroxisome | 31.01 | 39.54 |
| AT1G17550.1 | Thale cress | cytosol | 44.94 | 39.14 |
| TraesCS1B01G441400.1 | Wheat | cytosol | 32.58 | 37.76 |
| TraesCS3B01G266200.1 | Wheat | nucleus, peroxisome, plastid | 34.83 | 37.44 |
| TraesCS4B01G210100.1 | Wheat | nucleus | 31.69 | 34.73 |
| Solyc08g062650.2.1 | Tomato | extracellular | 36.4 | 34.54 |
| TraesCS3B01G394600.3 | Wheat | plastid | 32.13 | 33.41 |
| TraesCS3B01G171100.1 | Wheat | peroxisome | 23.6 | 29.91 |
| TraesCS2B01G023600.1 | Wheat | cytosol | 29.44 | 28.48 |
| TraesCS3B01G171000.1 | Wheat | cytosol, nucleus, peroxisome | 18.2 | 25.23 |
| TraesCS3B01G170900.1 | Wheat | peroxisome | 17.08 | 24.2 |
| TraesCS7B01G297000.2 | Wheat | plasma membrane | 23.15 | 9.65 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:11.1.2.1.1.2 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004722 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006464 | GO:GO:0006470 | GO:GO:0006950 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009414 |
| GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009788 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0043169 | GO:GO:0048364 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 | InterPro:PP2C |
| InterPro:PP2C_BS | InterPro:PPM-type_dom_sf | InterPro:PPM-type_phosphatase_dom | ScanProsite:PS01032 | PFscan:PS51746 | PANTHER:PTHR13832 |
| PANTHER:PTHR13832:SF312 | SMART:SM00332 | SUPFAM:SSF81606 | EnsemblPlantsGene:TraesCS1B01G475700 | EnsemblPlants:TraesCS1B01G475700.1 | TIGR:cd00143 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1B:-:684067251..684069246
Molecular Weight (calculated)
47224.7 Da
IEP (calculated)
4.836
GRAVY (calculated)
-0.385
Length
445 amino acids
Sequence
(BLAST)
(BLAST)
001: MDALGGALPR LALADADAGP DDACGSPCSV ASDCSSVASA DFEGLFSPSG ADAAPPSLLS DDLPAAAAEA AAVPGGACRS VFALDSPPLW GLESVCGRRP
101: EMEDAAAVVP RFYRVPLWMV AGDGAAVDGL DRASFRLPAH FFAVYDGHGG AQVADYCREK LHAALVEELR AAEDRVGGCD DLSSLDSKKQ WEKAFLDCFC
201: RVDTEAEAPD SAGSTAVTAV LCSSHIIVSN CGDSRAVLCR GKAPLPLSLD HKPNREDEYA RIEALGGKVI QWNGYRVLGV LAMSRSIGDR YLKPYIIPVP
301: EVTVVARARE DECLILASDG LWDVLSNEEV CDAARKRILL WHKKNATASS SISRGGSGGD GGSPDPAAQA AAEYLSKLAL QKGSKDNITV LVVDLKAHRK
401: FRSKTDNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNR
101: EMEDAAAVVP RFYRVPLWMV AGDGAAVDGL DRASFRLPAH FFAVYDGHGG AQVADYCREK LHAALVEELR AAEDRVGGCD DLSSLDSKKQ WEKAFLDCFC
201: RVDTEAEAPD SAGSTAVTAV LCSSHIIVSN CGDSRAVLCR GKAPLPLSLD HKPNREDEYA RIEALGGKVI QWNGYRVLGV LAMSRSIGDR YLKPYIIPVP
301: EVTVVARARE DECLILASDG LWDVLSNEEV CDAARKRILL WHKKNATASS SISRGGSGGD GGSPDPAAQA AAEYLSKLAL QKGSKDNITV LVVDLKAHRK
401: FRSKTDNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNR
001: MEEMTPAVAM TLSLAANTMC ESSPVEITQL KNVTDAADLL SDSENQSFCN GGTECTMEDV SELEEVGEQD LLKTLSDTRS GSSNVFDEDD VLSVVEDNSA
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T
Arabidopsis Description
HAB1Protein phosphatase 2C 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.