Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G350800.1 | Wheat | cytosol | 96.95 | 96.95 |
| HORVU7Hr1G079270.1 | Barley | cytosol | 91.88 | 91.88 |
| TraesCS7B01G232100.1 | Wheat | cytoskeleton, cytosol, nucleus | 90.36 | 91.28 |
| Os06t0528300-00 | Rice | cytosol | 64.47 | 61.65 |
| Os06t0527800-01 | Rice | cytosol | 63.96 | 61.16 |
| Os06t0526400-00 | Rice | cytosol | 59.9 | 60.2 |
| GSMUA_Achr10P... | Banana | cytosol | 54.82 | 58.06 |
| KRH18155 | Soybean | cytosol | 55.84 | 57.59 |
| KRH65845 | Soybean | cytosol | 55.84 | 56.99 |
| Bra033267.1-P | Field mustard | cytosol | 53.81 | 56.99 |
| CDX90028 | Canola | cytosol | 53.81 | 56.38 |
| VIT_16s0050g02620.t01 | Wine grape | cytosol | 52.79 | 56.22 |
| AT1G01360.1 | Thale cress | cytosol | 53.3 | 56.15 |
| PGSC0003DMT400012888 | Potato | cytosol | 50.25 | 55.93 |
| CDY04688 | Canola | cytosol | 52.79 | 55.91 |
| GSMUA_Achr4P08490_001 | Banana | cytosol | 56.35 | 55.78 |
| VIT_02s0025g01340.t01 | Wine grape | cytosol | 52.28 | 55.68 |
| CDY15183 | Canola | cytosol | 52.79 | 55.62 |
| GSMUA_Achr10P... | Banana | cytosol | 52.28 | 55.38 |
| Solyc12g055990.1.1 | Tomato | cytosol | 50.76 | 55.25 |
| KRH53449 | Soybean | cytosol | 52.79 | 54.45 |
| Bra003077.1-P | Field mustard | cytosol | 50.76 | 54.35 |
| CDY49462 | Canola | cytosol | 50.76 | 54.35 |
| Solyc03g007310.2.1 | Tomato | cytosol | 50.76 | 54.05 |
| KRH47929 | Soybean | cytosol | 50.76 | 54.05 |
| GSMUA_Achr2P19970_001 | Banana | cytosol | 50.76 | 53.76 |
| AT5G53160.2 | Thale cress | cytosol, nucleus, peroxisome | 51.27 | 53.72 |
| CDY64350 | Canola | cytosol | 49.75 | 53.55 |
| PGSC0003DMT400023511 | Potato | cytosol | 50.25 | 53.51 |
| CDY61488 | Canola | cytosol | 49.75 | 53.26 |
| PGSC0003DMT400031686 | Potato | cytosol | 50.76 | 52.91 |
| Solyc08g082180.2.1 | Tomato | cytosol | 50.76 | 52.91 |
| Bra029093.1-P | Field mustard | cytosol | 49.24 | 52.72 |
| CDY38728 | Canola | cytosol | 49.24 | 52.72 |
| GSMUA_AchrUn_... | Banana | cytosol | 49.75 | 52.69 |
| CDX96197 | Canola | cytosol | 50.25 | 52.66 |
| Bra022634.1-P | Field mustard | cytosol | 49.24 | 51.6 |
| AT4G27920.1 | Thale cress | cytosol | 47.72 | 51.37 |
| CDY25052 | Canola | cytosol | 48.73 | 51.34 |
| PGSC0003DMT400000606 | Potato | cytosol | 48.22 | 51.08 |
| Solyc01g095700.2.1 | Tomato | cytosol | 48.22 | 51.08 |
| CDY27022 | Canola | cytosol | 48.73 | 51.06 |
| CDX74368 | Canola | cytosol | 49.75 | 50.78 |
| VIT_15s0046g01050.t01 | Wine grape | cytosol | 49.24 | 50.52 |
| Bra003463.1-P | Field mustard | cytosol | 47.72 | 50.27 |
| CDY53905 | Canola | cytosol | 47.72 | 50.27 |
| Bra000938.1-P | Field mustard | cytosol | 49.24 | 50.26 |
| TraesCS1D01G126900.1 | Wheat | cytosol | 52.28 | 50.24 |
| GSMUA_Achr3P03480_001 | Banana | cytosol | 52.28 | 50.0 |
| CDX91871 | Canola | cytosol | 48.22 | 49.22 |
| Bra026299.1-P | Field mustard | cytosol | 45.18 | 48.37 |
| CDY70517 | Canola | cytosol | 45.18 | 48.11 |
| CDX89219 | Canola | cytosol | 45.18 | 48.11 |
| GSMUA_Achr8P19910_001 | Banana | mitochondrion | 50.25 | 47.37 |
| KRH65286 | Soybean | cytosol | 21.83 | 47.25 |
| KRH16733 | Soybean | cytosol | 24.87 | 46.67 |
| GSMUA_Achr4P15670_001 | Banana | cytosol | 43.15 | 45.45 |
| GSMUA_Achr2P15420_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 52.28 | 45.18 |
| AT4G01026.1 | Thale cress | cytosol | 47.72 | 44.55 |
| KRH06494 | Soybean | cytosol, extracellular, vacuole | 42.13 | 43.46 |
| CDY07165 | Canola | cytosol | 12.69 | 41.67 |
| Os06t0526466-00 | Rice | cytosol, mitochondrion | 28.93 | 41.3 |
| TraesCS7D01G364600.1 | Wheat | cytosol | 35.53 | 35.53 |
| TraesCS3D01G342000.1 | Wheat | plastid | 37.06 | 35.44 |
| TraesCS1D01G293600.1 | Wheat | mitochondrion, plastid | 35.53 | 34.83 |
| TraesCS4D01G191200.1 | Wheat | cytosol | 38.07 | 33.48 |
| TraesCS3D01G161500.1 | Wheat | cytosol, nucleus, plastid | 34.01 | 33.33 |
| TraesCS2D01G087500.1 | Wheat | plastid | 36.04 | 33.18 |
| TraesCS1D01G195300.1 | Wheat | cytosol | 32.99 | 30.52 |
Protein Annotations
| EnsemblPlants:TraesCS7D01G328000.1 | EnsemblPlantsGene:TraesCS7D01G328000 | Gene3D:3.30.530.20 | InterPro:IPR023393 | InterPro:Polyketide_cyclase/dehydratase | InterPro:START-like_dom_sf |
| PANTHER:PTHR31213 | PANTHER:PTHR31213:SF16 | PFAM:PF10604 | SUPFAM:SSF55961 | TIGR:cd07821 | MapMan:11.1.2.1.1.1 |
Description
No Description!
Coordinates
chr7D:-:419367281..419372128
Molecular Weight (calculated)
22511.8 Da
IEP (calculated)
6.344
GRAVY (calculated)
-0.389
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGGSSGVGA DGIWRPWDEH TVLRPEEMEY VRRFHQHEPG ANQCTSFIAK HIKAPLQTVW SVVRRFDKPQ VYKRFVENCV MQGNIEPGCV REVTLKSGLP
101: GKWSIERLEL LDDNEHILSV KFIDGDHPLK NYSSILTVHH EVIDGHPGAL VIESFVVDIP EENTKNEIFY LVGNFLKFNH KLLADVSEGR IDRRALN
101: GKWSIERLEL LDDNEHILSV KFIDGDHPLK NYSSILTVHH EVIDGHPGAL VIESFVVDIP EENTKNEIFY LVGNFLKFNH KLLADVSEGR IDRRALN
001: MEANGIENLT NPNQEREFIR RHHKHELVDN QCSSTLVKHI NAPVHIVWSL VRRFDQPQKY KPFISRCVVK GNMEIGTVRE VDVKSGLPAT RSTERLELLD
101: DNEHILSIRI VGGDHRLKNY SSIISLHPET IEGRIGTLVI ESFVVDVPEG NTKDETCYFV EALIKCNLKS LADISERLAV QDTTESRV
101: DNEHILSIRI VGGDHRLKNY SSIISLHPET IEGRIGTLVI ESFVVDVPEG NTKDETCYFV EALIKCNLKS LADISERLAV QDTTESRV
Arabidopsis Description
PYL8RCAR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UJN3]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.