Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G01026.1 | CDX72943 | AT1G72770.1 | 19407142 |
| AT4G01026.1 | CDX96432 | AT1G72770.1 | 19407142 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000938.1-P | Field mustard | cytosol | 98.45 | 98.45 |
| CDX91871 | Canola | cytosol | 95.34 | 95.34 |
| CDY04688 | Canola | cytosol | 77.72 | 80.65 |
| CDY15183 | Canola | cytosol | 77.72 | 80.21 |
| CDX90028 | Canola | cytosol | 77.72 | 79.79 |
| AT4G01026.1 | Thale cress | cytosol | 87.05 | 79.62 |
| CDY07165 | Canola | cytosol | 24.35 | 78.33 |
| VIT_02s0025g01340.t01 | Wine grape | cytosol | 72.02 | 75.14 |
| PGSC0003DMT400012888 | Potato | cytosol | 66.32 | 72.32 |
| CDY49462 | Canola | cytosol | 68.91 | 72.28 |
| GSMUA_Achr10P... | Banana | cytosol | 68.91 | 71.51 |
| Solyc12g055990.1.1 | Tomato | cytosol | 66.84 | 71.27 |
| CDY61488 | Canola | cytosol | 67.88 | 71.2 |
| Solyc08g082180.2.1 | Tomato | cytosol | 69.43 | 70.9 |
| PGSC0003DMT400031686 | Potato | cytosol | 69.43 | 70.9 |
| CDY25052 | Canola | cytosol | 68.39 | 70.59 |
| GSMUA_Achr2P19970_001 | Banana | cytosol | 67.88 | 70.43 |
| CDX96197 | Canola | cytosol | 68.39 | 70.21 |
| GSMUA_AchrUn_... | Banana | cytosol | 66.84 | 69.35 |
| CDY64350 | Canola | cytosol | 65.28 | 68.85 |
| GSMUA_Achr10P... | Banana | cytosol | 66.32 | 68.82 |
| CDY27022 | Canola | cytosol | 66.84 | 68.62 |
| HORVU0Hr1G032390.2 | Barley | cytosol, extracellular | 30.57 | 68.6 |
| CDY53905 | Canola | cytosol | 66.32 | 68.45 |
| CDY38728 | Canola | cytosol | 64.77 | 67.93 |
| GSMUA_Achr3P03480_001 | Banana | cytosol | 68.91 | 64.56 |
| Zm00001d037719_P001 | Maize | cytosol | 64.77 | 63.45 |
| Os02t0255500-01 | Rice | cytosol | 66.84 | 63.24 |
| EES17886 | Sorghum | cytosol | 64.25 | 62.94 |
| TraesCS1A01G126800.1 | Wheat | cytosol | 66.84 | 62.93 |
| TraesCS1B01G145800.1 | Wheat | cytosol | 66.84 | 62.93 |
| TraesCS1D01G126900.1 | Wheat | cytosol | 66.84 | 62.93 |
| CDX89219 | Canola | cytosol | 60.1 | 62.7 |
| CDY70517 | Canola | cytosol | 60.1 | 62.7 |
| Zm00001d010445_P001 | Maize | cytosol | 63.73 | 62.44 |
| Zm00001d016105_P001 | Maize | cytosol | 66.84 | 60.85 |
| EES04864 | Sorghum | cytosol | 66.32 | 60.66 |
| Os05t0213500-01 | Rice | cytosol, nucleus | 65.28 | 60.29 |
| GSMUA_Achr8P19910_001 | Banana | mitochondrion | 64.77 | 59.81 |
| Zm00001d053396_P001 | Maize | cytosol | 65.28 | 58.06 |
| GSMUA_Achr2P15420_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 67.88 | 57.46 |
| Zm00001d002533_P001 | Maize | cytosol | 36.27 | 55.56 |
| Os02t0255300-00 | Rice | cytosol, plastid | 50.78 | 54.44 |
| TraesCS7B01G232100.1 | Wheat | cytoskeleton, cytosol, nucleus | 52.85 | 52.31 |
| Os06t0528300-00 | Rice | cytosol | 55.44 | 51.94 |
| Os06t0527800-01 | Rice | cytosol | 54.4 | 50.97 |
| HORVU7Hr1G079270.1 | Barley | cytosol | 51.3 | 50.25 |
| TraesCS7D01G328000.1 | Wheat | cytosol | 50.78 | 49.75 |
| TraesCS7A01G350800.1 | Wheat | cytosol | 49.74 | 48.73 |
| Os06t0526400-00 | Rice | cytosol | 48.19 | 47.45 |
| CDY68675 | Canola | cytosol | 37.82 | 45.06 |
| CDY58053 | Canola | cytosol | 37.82 | 45.06 |
| HORVU1Hr1G030390.2 | Barley | extracellular, mitochondrion, plasma membrane | 66.84 | 44.33 |
| CDX91449 | Canola | plastid | 45.6 | 42.51 |
| CDX90440 | Canola | cytosol | 41.45 | 41.88 |
| CDY01498 | Canola | cytosol | 41.45 | 41.88 |
| CDY54453 | Canola | plastid | 45.08 | 41.83 |
| CDY69797 | Canola | cytosol | 40.93 | 41.36 |
| CDY18391 | Canola | plastid | 43.52 | 41.18 |
| CDY54415 | Canola | cytosol | 43.52 | 41.18 |
| HORVU3Hr1G054230.1 | Barley | mitochondrion | 33.68 | 40.88 |
| CDY70860 | Canola | cytosol | 39.38 | 40.86 |
| CDY07739 | Canola | plastid | 43.52 | 40.58 |
| CDY14471 | Canola | plastid | 43.52 | 40.58 |
| CDY04951 | Canola | cytosol | 40.93 | 40.1 |
| CDY58019 | Canola | cytosol | 34.2 | 39.76 |
| CDX78879 | Canola | cytosol | 34.2 | 39.76 |
| CDX99450 | Canola | cytosol | 34.2 | 39.76 |
| CDX93191 | Canola | cytosol | 40.93 | 38.92 |
| CDX76731 | Canola | cytosol | 37.82 | 38.83 |
| CDY11503 | Canola | cytosol | 37.82 | 38.83 |
| CDX70150 | Canola | cytosol | 40.93 | 38.73 |
| CDX98844 | Canola | cytosol | 40.93 | 38.73 |
| CDY52923 | Canola | cytosol | 40.93 | 38.54 |
| CDY72318 | Canola | cytosol | 39.9 | 37.93 |
| CDX80959 | Canola | cytosol | 39.38 | 37.44 |
| CDY58505 | Canola | nucleus | 40.41 | 37.14 |
| CDY24911 | Canola | cytosol, mitochondrion | 40.93 | 37.09 |
| CDY07608 | Canola | cytosol, mitochondrion | 40.41 | 36.79 |
| CDX77691 | Canola | nucleus | 40.41 | 36.28 |
| CDX74796 | Canola | cytosol, nucleus, plastid | 38.86 | 35.38 |
| CDY18867 | Canola | cytosol, mitochondrion, nucleus, plastid | 38.86 | 35.38 |
| CDY08877 | Canola | cytosol | 27.98 | 34.84 |
| CDX76554 | Canola | cytosol | 27.98 | 34.84 |
| CDY68316 | Canola | nucleus | 34.2 | 34.55 |
| CDY48030 | Canola | plastid | 36.27 | 34.15 |
| CDY22516 | Canola | plastid | 35.75 | 33.66 |
| CDX82120 | Canola | plastid | 35.75 | 33.66 |
| CDY03194 | Canola | nucleus | 33.16 | 33.51 |
| Os06t0526466-00 | Rice | cytosol, mitochondrion | 20.21 | 28.26 |
Protein Annotations
| EnsemblPlants:CDX74368 | EnsemblPlantsGene:GSBRNA2T00112177001 | Gene3D:3.30.530.20 | InterPro:IPR023393 | InterPro:Polyketide_cyclase/dehydratase | InterPro:START-like_dom_sf |
| PANTHER:PTHR31213 | PANTHER:PTHR31213:SF4 | PFAM:PF10604 | ProteinID:CDX74368 | ProteinID:CDX74368.1 | SUPFAM:SSF55961 |
| UniParc:UPI0004EE969C | MapMan:11.1.2.1.1.1 | : | : | : | : |
Description
BnaA03g26790D
Coordinates
chrLK031800:-:2465902..2467082
Molecular Weight (calculated)
21797.2 Da
IEP (calculated)
6.708
GRAVY (calculated)
-0.236
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEIIVNDSE MYGALVTAQY ARLHHRHHCR ENQCTSFLVK YIKAPVHLVW SLVRRFDEPQ KYKPFVSRCT VQGHPEIGSL REVNVKSGLP ATTSTERLEQ
101: LDDNERILGI NIIGGDHRLK NYSSILTVHP EMIEGRAGTM VIESFVVDVP QGNTKDETCY FVESLIKCNL KSLACVSERL AAQDITNPIA PAF
101: LDDNERILGI NIIGGDHRLK NYSSILTVHP EMIEGRAGTM VIESFVVDVP QGNTKDETCY FVESLIKCNL KSLACVSERL AAQDITNPIA PAF
001: MEMIGGDDTD TEMYGALVTA QSLRLRHLHH CRENQCTSVL VKYIQAPVHL VWSLVRRFDQ PQKYKPFISR CTVNGDPEIG CLREVNVKSG LPATTSTERL
101: EQLDDEEHIL GINIIGGDHR LKNYSSILTV HPEMIDGRSG TMVMESFVVD VPQGNTKDDT CYFVESLIKC NLKSLACVSE RLAAQDITNS IATFCNASNG
201: YREKNHTETN L
101: EQLDDEEHIL GINIIGGDHR LKNYSSILTV HPEMIDGRSG TMVMESFVVD VPQGNTKDDT CYFVESLIKC NLKSLACVSE RLAAQDITNS IATFCNASNG
201: YREKNHTETN L
Arabidopsis Description
PYL7RCAR2 [Source:UniProtKB/TrEMBL;Acc:A0A178UTD1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.