CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53905	Canola	cytosol	93.05	93.05
VIT_02s0025g01340.t01	Wine grape	cytosol	73.26	74.05
KRH47929	Soybean	cytosol	72.73	73.51
PGSC0003DMT400012888	Potato	cytosol	67.91	71.75
GSMUA_Achr10P...	Banana	cytosol	71.12	71.51
Solyc12g055990.1.1	Tomato	cytosol	68.98	71.27
CDY49462	Canola	cytosol	70.05	71.2
CDY61488	Canola	cytosol	70.05	71.2
CDY04688	Canola	cytosol	70.59	70.97
GSMUA_Achr10P...	Banana	cytosol	70.59	70.97
CDY15183	Canola	cytosol	70.05	70.05
CDY64350	Canola	cytosol	68.45	69.95
CDX96197	Canola	cytosol	70.05	69.68
CDY38728	Canola	cytosol	68.45	69.57
PGSC0003DMT400031686	Potato	cytosol	70.05	69.31
Solyc08g082180.2.1	Tomato	cytosol	70.05	69.31
CDX90028	Canola	cytosol	69.52	69.15
CDX91871	Canola	cytosol	71.12	68.91
GSMUA_AchrUn_...	Banana	cytosol	68.45	68.82
CDY27022	Canola	cytosol	68.98	68.62
CDX74368	Canola	cytosol	70.59	68.39
GSMUA_Achr2P19970_001	Banana	cytosol	66.31	66.67
CDY70517	Canola	cytosol	65.78	66.49
CDX89219	Canola	cytosol	65.24	65.95
HORVU0Hr1G032390.2	Barley	cytosol, extracellular	29.41	63.95
CDY07165	Canola	cytosol	20.32	63.33
GSMUA_Achr3P03480_001	Banana	cytosol	69.52	63.11
Os02t0255500-01	Rice	cytosol	67.91	62.25
KRH06494	Soybean	cytosol, extracellular, vacuole	63.1	61.78
Os05t0213500-01	Rice	cytosol, nucleus	68.45	61.24
TraesCS1D01G126900.1	Wheat	cytosol	66.84	60.98
TraesCS1B01G145800.1	Wheat	cytosol	66.84	60.98
TraesCS1A01G126800.1	Wheat	cytosol	66.84	60.98
GSMUA_Achr8P19910_001	Banana	mitochondrion	67.91	60.77
Zm00001d010445_P001	Maize	cytosol	63.64	60.41
EES17886	Sorghum	cytosol	63.64	60.41
Zm00001d016105_P001	Maize	cytosol	67.91	59.91
Zm00001d037719_P001	Maize	cytosol	63.1	59.9
EES04864	Sorghum	cytosol	66.31	58.77
Zm00001d002533_P001	Maize	cytosol	37.97	56.35
GSMUA_Achr2P15420_001	Banana	cytosol, mitochondrion, nucleus, plastid	68.45	56.14
Zm00001d053396_P001	Maize	cytosol	64.71	55.76
Os02t0255300-00	Rice	cytosol, plastid	52.94	55.0
Os06t0528300-00	Rice	cytosol	58.29	52.91
Os06t0527800-01	Rice	cytosol	57.75	52.43
Os06t0526400-00	Rice	cytosol	52.94	50.51
TraesCS7B01G232100.1	Wheat	cytoskeleton, cytosol, nucleus	52.41	50.26
HORVU7Hr1G079270.1	Barley	cytosol	51.34	48.73
TraesCS7D01G328000.1	Wheat	cytosol	51.34	48.73
TraesCS7A01G350800.1	Wheat	cytosol	49.73	47.21
CDY68675	Canola	cytosol	39.04	45.06
CDY58053	Canola	cytosol	39.04	45.06
HORVU1Hr1G030390.2	Barley	extracellular, mitochondrion, plasma membrane	66.84	42.96
HORVU3Hr1G054230.1	Barley	mitochondrion	35.83	42.14
CDX91449	Canola	plastid	46.52	42.03
CDY11503	Canola	cytosol	42.25	42.02
CDX76731	Canola	cytosol	42.25	42.02
CDY69797	Canola	cytosol	42.78	41.88
CDX90440	Canola	cytosol	42.78	41.88
CDY01498	Canola	cytosol	42.78	41.88
CDY70860	Canola	cytosol	41.18	41.4
CDY54453	Canola	plastid	45.99	41.35
CDY54415	Canola	cytosol	44.92	41.18
CDY18391	Canola	plastid	44.92	41.18
CDY58505	Canola	nucleus	45.99	40.95
CDX93191	Canola	cytosol	44.38	40.89
CDY04951	Canola	cytosol	42.78	40.61
CDY07739	Canola	plastid	44.92	40.58
CDY14471	Canola	plastid	44.92	40.58
CDY52923	Canola	cytosol	44.38	40.49
CDX78879	Canola	cytosol	35.83	40.36
CDX99450	Canola	cytosol	35.83	40.36
CDY58019	Canola	cytosol	35.83	40.36
CDX70150	Canola	cytosol	43.85	40.2
CDX98844	Canola	cytosol	43.85	40.2
CDX77691	Canola	nucleus	45.99	40.0
CDY72318	Canola	cytosol	42.25	38.92
CDY07608	Canola	cytosol, mitochondrion	43.85	38.68
CDY24911	Canola	cytosol, mitochondrion	43.85	38.5
CDY03194	Canola	nucleus	39.04	38.22
CDX80959	Canola	cytosol	41.18	37.93
CDY68316	Canola	nucleus	38.5	37.7
CDX74796	Canola	cytosol, nucleus, plastid	42.25	37.26
CDY18867	Canola	cytosol, mitochondrion, nucleus, plastid	41.71	36.79
CDX76554	Canola	cytosol	30.48	36.77
CDY08877	Canola	cytosol	30.48	36.77
CDX82120	Canola	plastid	37.43	34.15
CDY48030	Canola	plastid	37.43	34.15
CDY22516	Canola	plastid	37.43	34.15
Os06t0526466-00	Rice	cytosol, mitochondrion	21.93	29.71

Protein Annotations

EnsemblPlants:CDY25052	EnsemblPlantsGene:GSBRNA2T00028887001	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase	InterPro:START-like_dom_sf
PANTHER:PTHR31213	PANTHER:PTHR31213:SF4	PFAM:PF10604	ProteinID:CDY25052	ProteinID:CDY25052.1	SUPFAM:SSF55961
UniParc:UPI0004EC55CF	UniProt:A0A078GIR6	MapMan:11.1.2.1.1.1	:	:	:

Description

BnaC06g17940DBnaC06g17940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GIR6]

Coordinates

chrLK032168:-:25298..26282

Molecular Weight (calculated)

20855.1 Da

IEP (calculated)

7.137

GRAVY (calculated)

-0.190

Length

187 amino acids

Sequence
(BLAST)

001: MNSTIAADNG RVSGGAAEFL QIRLNHRHDP KENQCSSVLV KHIKAPVHLV WSLVRRFDQP QKYKPFVSRC VMKGDVCIGC VREVDVRSGL PATTSTERLE
101: FLDDNEHILG IRILGGDHRL KNYSSVVTVH PEIIDGRAGT MVIESFVVDV PEGNTKDETC YFVEALIRCN LKSLSSVCER MAAQDMT

Best Arabidopsis Sequence Match ( AT1G01360.1 )
(BLAST)

001: MMDGVEGGTA MYGGLETVQY VRTHHQHLCR ENQCTSALVK HIKAPLHLVW SLVRRFDQPQ KYKPFVSRCT VIGDPEIGSL REVNVKSGLP ATTSTERLEL
101: LDDEEHILGI KIIGGDHRLK NYSSILTVHP EIIEGRAGTM VIESFVVDVP QGNTKDETCY FVEALIRCNL KSLADVSERL ASQDITQ

Arabidopsis Description

PYL9RCAR1 [Source:UniProtKB/TrEMBL;Acc:A0A178W4H4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.