Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017012.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDX93191 | Canola | cytosol | 97.56 | 98.52 |
| CDY07608 | Canola | cytosol, mitochondrion | 88.29 | 85.38 |
| CDY24911 | Canola | cytosol, mitochondrion | 88.29 | 84.98 |
| CDX74796 | Canola | cytosol, nucleus, plastid | 87.32 | 84.43 |
| AT2G40330.1 | Thale cress | cytosol | 87.8 | 83.72 |
| CDY18867 | Canola | cytosol, mitochondrion, nucleus, plastid | 85.85 | 83.02 |
| Solyc05g052420.1.1 | Tomato | cytosol | 23.9 | 59.76 |
| TraesCS4A01G114400.1 | Wheat | cytosol | 51.71 | 59.22 |
| PGSC0003DMT400053102 | Potato | cytosol, plastid | 56.1 | 57.21 |
| PGSC0003DMT400053119 | Potato | cytosol, plastid | 56.1 | 57.21 |
| PGSC0003DMT400053120 | Potato | cytosol, plastid | 56.1 | 57.21 |
| Solyc03g095780.1.1 | Tomato | plastid | 56.1 | 57.21 |
| KRH73249 | Soybean | plastid | 57.56 | 56.73 |
| TraesCS1B01G306800.1 | Wheat | mitochondrion | 53.66 | 56.7 |
| CDY58053 | Canola | cytosol | 43.9 | 55.56 |
| CDY68675 | Canola | cytosol | 43.9 | 55.56 |
| CDY54415 | Canola | cytosol | 55.12 | 55.39 |
| CDY18391 | Canola | plastid | 55.12 | 55.39 |
| TraesCS1D01G293600.1 | Wheat | mitochondrion, plastid | 54.15 | 55.22 |
| CDY14471 | Canola | plastid | 55.61 | 55.07 |
| CDY07739 | Canola | plastid | 55.61 | 55.07 |
| CDX91449 | Canola | plastid | 55.61 | 55.07 |
| Zm00001d038436_P001 | Maize | plastid | 53.66 | 55.0 |
| TraesCS1A01G297600.1 | Wheat | mitochondrion | 53.66 | 54.73 |
| HORVU1Hr1G070420.1 | Barley | mitochondrion | 53.17 | 54.23 |
| TraesCS3B01G380300.1 | Wheat | mitochondrion, plastid | 54.63 | 54.11 |
| HORVU3Hr1G039010.1 | Barley | plastid | 54.15 | 53.88 |
| HORVU3Hr1G088100.1 | Barley | plastid | 54.15 | 53.88 |
| CDY54453 | Canola | plastid | 54.63 | 53.85 |
| TraesCS3D01G342000.1 | Wheat | plastid | 53.66 | 53.4 |
| KRH14908 | Soybean | plastid | 56.59 | 53.21 |
| GSMUA_Achr9P04600_001 | Banana | cytosol | 37.07 | 53.15 |
| TraesCS3A01G348400.1 | Wheat | plastid | 53.17 | 52.91 |
| Os05t0473000-01 | Rice | cytosol | 55.61 | 52.53 |
| PGSC0003DMT400069734 | Potato | mitochondrion, plastid | 53.17 | 52.4 |
| PGSC0003DMT400061535 | Potato | plastid | 55.61 | 52.29 |
| GSMUA_Achr6P32790_001 | Banana | cytosol | 53.66 | 52.13 |
| EES19683 | Sorghum | plastid | 54.63 | 51.85 |
| CDX80959 | Canola | cytosol | 51.22 | 51.72 |
| CDY72318 | Canola | cytosol | 51.22 | 51.72 |
| Zm00001d043014_P001 | Maize | cytosol | 53.66 | 51.64 |
| CDX98844 | Canola | cytosol | 51.22 | 51.47 |
| CDX70150 | Canola | cytosol | 50.73 | 50.98 |
| CDY04951 | Canola | cytosol | 48.78 | 50.76 |
| TraesCS2D01G087500.1 | Wheat | plastid | 52.68 | 50.47 |
| HORVU4Hr1G055220.1 | Barley | cytosol | 55.12 | 50.45 |
| GSMUA_Achr9P17980_001 | Banana | cytosol | 36.59 | 50.34 |
| TraesCS4D01G191200.1 | Wheat | cytosol | 54.63 | 50.0 |
| TraesCS4B01G189800.1 | Wheat | cytosol | 54.63 | 50.0 |
| TraesCS2B01G105300.1 | Wheat | plastid | 52.68 | 49.77 |
| EER92405 | Sorghum | plastid | 53.66 | 49.55 |
| Zm00001d047705_P001 | Maize | plastid | 52.68 | 49.54 |
| CDX78879 | Canola | cytosol | 40.0 | 49.4 |
| CDX99450 | Canola | cytosol | 40.0 | 49.4 |
| CDY58019 | Canola | cytosol | 40.0 | 49.4 |
| GSMUA_AchrUn_... | Banana | plastid | 38.05 | 49.37 |
| GSMUA_Achr11P... | Banana | cytosol, plastid | 37.56 | 48.73 |
| Zm00001d028793_P001 | Maize | cytosol, mitochondrion, plastid | 51.71 | 48.18 |
| GSMUA_Achr5P29490_001 | Banana | plastid | 38.05 | 48.15 |
| Os03t0297600-01 | Rice | cytosol | 53.66 | 48.03 |
| CDY11503 | Canola | cytosol | 41.95 | 45.74 |
| CDX76731 | Canola | cytosol | 41.46 | 45.21 |
| CDY53905 | Canola | cytosol | 40.98 | 44.92 |
| KRH31193 | Soybean | cytosol, golgi, plastid | 56.1 | 44.75 |
| GSMUA_Achr8P21220_001 | Banana | cytosol | 37.07 | 44.71 |
| CDY25052 | Canola | cytosol | 40.49 | 44.38 |
| CDX90028 | Canola | cytosol | 40.49 | 44.15 |
| Os01t0827800-00 | Rice | plastid | 55.12 | 44.14 |
| CDY15183 | Canola | cytosol | 40.0 | 43.85 |
| CDY04688 | Canola | cytosol | 39.51 | 43.55 |
| CDX89219 | Canola | cytosol | 39.02 | 43.24 |
| CDX90440 | Canola | cytosol | 40.0 | 42.93 |
| CDY01498 | Canola | cytosol | 40.0 | 42.93 |
| Solyc06g050500.2.1 | Tomato | plastid | 56.59 | 42.18 |
| CDY70860 | Canola | cytosol | 38.05 | 41.94 |
| CDY69797 | Canola | cytosol | 39.02 | 41.88 |
| CDY49462 | Canola | cytosol | 37.56 | 41.85 |
| CDY61488 | Canola | cytosol | 37.56 | 41.85 |
| CDY70517 | Canola | cytosol | 37.56 | 41.62 |
| CDY64350 | Canola | cytosol | 37.07 | 41.53 |
| CDX96197 | Canola | cytosol | 38.05 | 41.49 |
| CDY38728 | Canola | cytosol | 37.07 | 41.3 |
| CDX74368 | Canola | cytosol | 38.54 | 40.93 |
| CDY27022 | Canola | cytosol | 37.07 | 40.43 |
| CDX91871 | Canola | cytosol | 38.05 | 40.41 |
| GSMUA_Achr10P... | Banana | cytosol, plastid | 38.05 | 39.39 |
| CDY22516 | Canola | plastid | 38.05 | 38.05 |
| CDX82120 | Canola | plastid | 38.05 | 38.05 |
| CDY48030 | Canola | plastid | 38.05 | 38.05 |
| OQU87775 | Sorghum | endoplasmic reticulum, extracellular | 50.24 | 37.87 |
| TraesCS2A01G089400.1 | Wheat | plastid | 52.68 | 37.76 |
| CDY58505 | Canola | nucleus | 38.54 | 37.62 |
| CDY68316 | Canola | nucleus | 34.63 | 37.17 |
| CDY08877 | Canola | cytosol | 27.8 | 36.77 |
| CDX76554 | Canola | cytosol | 27.8 | 36.77 |
| CDX77691 | Canola | nucleus | 38.54 | 36.74 |
| CDY03194 | Canola | nucleus | 34.15 | 36.65 |
| CDY07165 | Canola | cytosol | 10.24 | 35.0 |
| Zm00001d012475_P001 | Maize | cytosol | 51.71 | 33.97 |
Protein Annotations
| EnsemblPlants:CDY52923 | EnsemblPlantsGene:GSBRNA2T00008105001 | Gene3D:3.30.530.20 | InterPro:IPR023393 | InterPro:Polyketide_cyclase/dehydratase | InterPro:START-like_dom_sf |
| PANTHER:PTHR31213 | PANTHER:PTHR31213:SF3 | PFAM:PF10604 | ProteinID:CDY52923 | ProteinID:CDY52923.1 | SEG:seg |
| SUPFAM:SSF55961 | UniParc:UPI0002544F35 | UniProt:A0A078IVA5 | MapMan:11.1.2.1.1.1 | : | : |
Description
BnaA04g29300DBnaA04g29300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IVA5]
Coordinates
chrLK033142:-:18174..19126
Molecular Weight (calculated)
22766.7 Da
IEP (calculated)
6.569
GRAVY (calculated)
-0.403
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MPTSLQFQRP STAAESANHH HHKQLQKMSL TRGMADVPEH VELSHTHVVE PSQCFSVVVQ DVDAPASAVW SILSRFEHPQ AYKHFVRSCH VAAGDGREVG
101: SVREVRVVSG LPAAFSLERL EIMDDDRHVM SFSVVGGDHR LQNYRSVTTV HESTDDNKKT RVVESYVVDV PAGNDKDETC SFADTIVRCN LQSLAKLAEN
201: PPRIS
101: SVREVRVVSG LPAAFSLERL EIMDDDRHVM SFSVVGGDHR LQNYRSVTTV HESTDDNKKT RVVESYVVDV PAGNDKDETC SFADTIVRCN LQSLAKLAEN
201: PPRIS
001: MPTSIQFQRS STAAEAANAT VRNYPHHHQK QVQKVSLTRG MADVPEHVEL SHTHVVGPSQ CFSVVVQDVE APVSTVWSIL SRFEHPQAYK HFVKSCHVVI
101: GDGREVGSVR EVRVVSGLPA AFSLERLEIM DDDRHVISFS VVGGDHRLMN YKSVTTVHES EEDSDGKKRT RVVESYVVDV PAGNDKEETC SFADTIVRCN
201: LQSLAKLAEN TSKFS
101: GDGREVGSVR EVRVVSGLPA AFSLERLEIM DDDRHVISFS VVGGDHRLMN YKSVTTVHES EEDSDGKKRT RVVESYVVDV PAGNDKEETC SFADTIVRCN
201: LQSLAKLAEN TSKFS
Arabidopsis Description
PYL6Abscisic acid receptor PYL6 [Source:UniProtKB/Swiss-Prot;Acc:Q8S8E3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.