Factsheet for PGSC0003DMT400069734

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 3
mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400006585
PGSC0003DMT400006608
PGSC0003DMT400083452

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G40330.1	PGSC0003DMT400006608	AT1G72770.1	19407142
AT2G40330.1	PGSC0003DMT400006608	AT1G72770.1	19624469
AT2G40330.1	PGSC0003DMT400006585	AT2G20000.1	17944809
AT2G40330.1	PGSC0003DMT400083452	AT2G20000.1	17944809

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g052420.1.1	Tomato	cytosol	35.58	90.24
PGSC0003DMT400053120	Potato	cytosol, plastid	68.27	70.65
PGSC0003DMT400053119	Potato	cytosol, plastid	68.27	70.65
PGSC0003DMT400053102	Potato	cytosol, plastid	68.27	70.65
PGSC0003DMT400061535	Potato	plastid	70.19	66.97
PGSC0003DMT400028658	Potato	nucleus	60.1	58.69
PGSC0003DMT400075056	Potato	plastid	60.1	58.41
PGSC0003DMT400041080	Potato	mitochondrion	57.69	57.97
KRH73249	Soybean	plastid	57.69	57.69
TraesCS4A01G114400.1	Wheat	cytosol	49.52	57.54
TraesCS3B01G380300.1	Wheat	mitochondrion, plastid	54.33	54.59
HORVU3Hr1G039010.1	Barley	plastid	53.37	53.88
TraesCS3A01G348400.1	Wheat	plastid	53.37	53.88
TraesCS3D01G342000.1	Wheat	plastid	53.37	53.88
HORVU3Hr1G088100.1	Barley	plastid	53.37	53.88
KRH14908	Soybean	plastid	56.25	53.67
TraesCS1B01G306800.1	Wheat	mitochondrion	50.0	53.61
CDX74796	Canola	cytosol, nucleus, plastid	54.33	53.3
CDX93191	Canola	cytosol	51.92	53.2
Bra017012.1-P	Field mustard	cytosol	52.4	53.17
CDY52923	Canola	cytosol	52.4	53.17
GSMUA_Achr9P04600_001	Banana	cytosol	36.54	53.15
GSMUA_Achr6P32790_001	Banana	cytosol	53.85	53.08
Zm00001d038436_P001	Maize	plastid	50.96	53.0
TraesCS1A01G297600.1	Wheat	mitochondrion	50.96	52.74
TraesCS1D01G293600.1	Wheat	mitochondrion, plastid	50.96	52.74
HORVU1Hr1G070420.1	Barley	mitochondrion	50.96	52.74
Bra004967.1-P	Field mustard	mitochondrion	53.37	52.36
AT2G40330.1	Thale cress	cytosol	53.85	52.09
Os05t0473000-01	Rice	cytosol	53.85	51.61
TraesCS2B01G105300.1	Wheat	plastid	53.85	51.61
TraesCS2D01G087500.1	Wheat	plastid	52.88	51.4
GSMUA_Achr5P29490_001	Banana	plastid	39.9	51.23
CDY18867	Canola	cytosol, mitochondrion, nucleus, plastid	51.92	50.94
CDY07608	Canola	cytosol, mitochondrion	50.96	50.0
Bra000184.1-P	Field mustard	cytosol, mitochondrion	50.96	50.0
CDY24911	Canola	cytosol, mitochondrion	50.96	49.77
GSMUA_Achr9P17980_001	Banana	cytosol	35.58	49.66
EES19683	Sorghum	plastid	51.44	49.54
Zm00001d043014_P001	Maize	cytosol	50.48	49.3
GSMUA_Achr11P...	Banana	cytosol, plastid	37.02	48.73
GSMUA_AchrUn_...	Banana	plastid	37.02	48.73
Zm00001d047705_P001	Maize	plastid	50.96	48.62
TraesCS4B01G189800.1	Wheat	cytosol	51.92	48.21
Zm00001d028793_P001	Maize	cytosol, mitochondrion, plastid	50.96	48.18
TraesCS4D01G191200.1	Wheat	cytosol	51.44	47.77
HORVU4Hr1G055220.1	Barley	cytosol	51.44	47.77
EER92405	Sorghum	plastid	50.96	47.75
PGSC0003DMT400023511	Potato	cytosol	42.31	47.57
PGSC0003DMT400000606	Potato	cytosol	42.31	47.31
PGSC0003DMT400012888	Potato	cytosol	39.9	46.89
Os03t0297600-01	Rice	cytosol	50.96	46.29
PGSC0003DMT400031686	Potato	cytosol	41.83	46.03
KRH31193	Soybean	cytosol, golgi, plastid	56.25	45.53
GSMUA_Achr8P21220_001	Banana	cytosol	36.54	44.71
PGSC0003DMT400077008	Potato	cytosol	40.38	44.68
PGSC0003DMT400075340	Potato	cytosol	39.9	43.68
Os01t0827800-00	Rice	plastid	51.92	42.19
PGSC0003DMT400005378	Potato	nucleus	41.83	40.85
GSMUA_Achr10P...	Banana	cytosol, plastid	38.46	40.4
PGSC0003DMT400026521	Potato	cytosol	36.06	39.27
PGSC0003DMT400045156	Potato	nucleus	42.79	38.53
TraesCS2A01G089400.1	Wheat	plastid	52.88	38.46
OQU87775	Sorghum	endoplasmic reticulum, extracellular	50.0	38.24
Zm00001d012475_P001	Maize	cytosol	52.4	34.94

Protein Annotations

EnsemblPlants:PGSC0003DMT400069734	EnsemblPlantsGene:PGSC0003DMG400027118	EntrezGene:102578907	Gene3D:3.30.530.20	InterPro:IPR023393	InterPro:Polyketide_cyclase/dehydratase
InterPro:START-like_dom_sf	PANTHER:PTHR31213	PANTHER:PTHR31213:SF48	PFAM:PF10604	PGSC:PGSC0003DMG400027118	RefSeq:XP_006355640.1
SEG:seg	SUPFAM:SSF55961	UniParc:UPI000295F245	UniProt:M1CL11	MapMan:11.1.2.1.1.1	:

Description

Abscisic acid receptor PYL4 [Source:PGSC_GENE;Acc:PGSC0003DMG400027118]

Coordinates

chr5:+:47710525..47711337

Molecular Weight (calculated)

22887.1 Da

IEP (calculated)

7.668

GRAVY (calculated)

-0.283

Length

208 amino acids

Sequence
(BLAST)

001: MTSTLQLRRI NHHNAATLAG NFPMTTTNNV SVPDNHFHYH THPVGPNNNQ CCSAVVRSIS ASIDTVWSII RRFDNPQAYK NFLKSCHVIV GDGKVVGSLR
101: EVHVITGLPA ASSIERLEIL DDEKKVMSIS IVGGDHRLNN YRSVTTLHRT AADDGGDGDR TVVVESYVVD VPQGNTKEET RVFVDTIVRC NLQSLGKIAE
201: NLEKAKSI

Best Arabidopsis Sequence Match ( AT1G01360.1 )
(BLAST)

001: MMDGVEGGTA MYGGLETVQY VRTHHQHLCR ENQCTSALVK HIKAPLHLVW SLVRRFDQPQ KYKPFVSRCT VIGDPEIGSL REVNVKSGLP ATTSTERLEL
101: LDDEEHILGI KIIGGDHRLK NYSSILTVHP EIIEGRAGTM VIESFVVDVP QGNTKDETCY FVEALIRCNL KSLADVSERL ASQDITQ

Arabidopsis Description

PYL9RCAR1 [Source:UniProtKB/TrEMBL;Acc:A0A178W4H4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.