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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 4
  • cytosol 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:plastid
Plant-mPloc:cytosol
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
EER88444
EER92493
EER96576
EES00964
EES01744
KXG22152
KXG22422
KXG22681
KXG33895
KXG35986
OQU87413

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G38310.1 EES00964 AT1G72770.1 19407142
AT2G38310.1 KXG22422 AT1G72770.1 19407142
AT2G38310.1 KXG22681 AT1G72770.1 19407142
AT2G38310.1 OQU87413 AT1G72770.1 19407142
AT2G38310.1 EES00964 AT1G72770.1 19624469
AT2G38310.1 KXG22422 AT1G72770.1 19624469
AT2G38310.1 KXG22681 AT1G72770.1 19624469
AT2G38310.1 OQU87413 AT1G72770.1 19624469
AT2G38310.1 EER92493 AT3G11410.1 19407142
AT2G38310.1 EER96576 AT3G11410.1 19407142
AT2G38310.1 EES01744 AT3G11410.1 19407142
AT2G38310.1 KXG22152 AT3G11410.1 19407142
AT2G38310.1 KXG35986 AT3G11410.1 19407142
AT2G38310.1 EER88444 AT4G18340.1 19407142
AT2G38310.1 EER92493 AT5G59220.1 19407142
AT2G38310.1 EER96576 AT5G59220.1 19407142
AT2G38310.1 EES01744 AT5G59220.1 19407142
AT2G38310.1 KXG22152 AT5G59220.1 19407142
AT2G38310.1 KXG35986 AT5G59220.1 19407142
AT2G40330.1 EES00964 AT1G72770.1 19407142
AT2G40330.1 KXG22422 AT1G72770.1 19407142
AT2G40330.1 KXG22681 AT1G72770.1 19407142
AT2G40330.1 OQU87413 AT1G72770.1 19407142
AT2G40330.1 EES00964 AT1G72770.1 19624469
AT2G40330.1 KXG22422 AT1G72770.1 19624469
AT2G40330.1 KXG22681 AT1G72770.1 19624469
AT2G40330.1 OQU87413 AT1G72770.1 19624469
AT2G40330.1 KXG33895 AT2G20000.1 17944809
AT5G05440.1 EES00964 AT1G72770.1 19407142
AT5G05440.1 KXG22422 AT1G72770.1 19407142
AT5G05440.1 KXG22681 AT1G72770.1 19407142
AT5G05440.1 OQU87413 AT1G72770.1 19407142
AT5G05440.1 EES00964 AT1G72770.1 19624469
AT5G05440.1 KXG22422 AT1G72770.1 19624469
AT5G05440.1 KXG22681 AT1G72770.1 19624469
AT5G05440.1 OQU87413 AT1G72770.1 19624469
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d038436_P001 Maize plastid 89.81 97.0
TraesCS1B01G306800.1 Wheat mitochondrion 78.24 87.11
TraesCS1A01G297600.1 Wheat mitochondrion 80.56 86.57
HORVU1Hr1G070420.1 Barley mitochondrion 79.63 85.57
TraesCS1D01G293600.1 Wheat mitochondrion, plastid 79.17 85.07
Os05t0473000-01 Rice cytosol 84.26 83.87
TraesCS3D01G342000.1 Wheat plastid 78.24 82.04
HORVU3Hr1G039010.1 Barley plastid 77.78 81.55
HORVU3Hr1G088100.1 Barley plastid 77.78 81.55
TraesCS3A01G348400.1 Wheat plastid 77.78 81.55
TraesCS3B01G380300.1 Wheat mitochondrion, plastid 76.85 80.19
Bra028758.1-P Field mustard cytosol 49.07 64.24
EER92405 Sorghum plastid 65.74 63.96
KRH00319 Soybean cytosol 52.31 63.84
GSMUA_Achr11P... Banana cytosol, plastid 46.3 63.29
KRH49452 Soybean plastid 50.93 61.8
Os01t0827800-00 Rice plastid 73.15 61.72
Solyc05g052420.1.1 Tomato cytosol 23.15 60.98
KRH73249 Soybean plastid 58.33 60.58
GSMUA_Achr5P29490_001 Banana plastid 45.37 60.49
KRH14908 Soybean plastid 57.87 57.34
Solyc03g095780.1.1 Tomato plastid 53.24 57.21
CDY18391 Canola plastid 53.7 56.86
Bra017125.1-P Field mustard plastid 53.7 56.86
CDY54415 Canola cytosol 53.7 56.86
PGSC0003DMT400053102 Potato cytosol, plastid 52.78 56.72
PGSC0003DMT400053119 Potato cytosol, plastid 52.78 56.72
PGSC0003DMT400053120 Potato cytosol, plastid 52.78 56.72
VIT_13s0067g01940.t01 Wine grape plastid 55.56 56.6
Solyc10g076410.1.1 Tomato plastid 52.78 56.16
CDY04951 Canola cytosol 50.93 55.84
Bra000052.1-P Field mustard plastid 53.24 55.56
CDY07739 Canola plastid 53.24 55.56
PGSC0003DMT400028658 Potato nucleus 54.63 55.4
Solyc10g085310.1.1 Tomato plastid 54.63 55.4
CDX93191 Canola cytosol 51.85 55.17
KRH76014 Soybean cytosol 55.09 55.09
CDX91449 Canola plastid 52.78 55.07
CDY14471 Canola plastid 52.78 55.07
AT2G38310.1 Thale cress plastid 52.78 55.07
CDX98844 Canola cytosol 51.85 54.9
CDY54453 Canola plastid 52.78 54.81
AT5G05440.1 Thale cress cytosol 51.39 54.68
CDY52923 Canola cytosol 51.85 54.63
Bra017012.1-P Field mustard cytosol 51.85 54.63
PGSC0003DMT400041080 Potato mitochondrion 52.31 54.59
CDX70150 Canola cytosol 51.39 54.41
Bra009113.1-P Field mustard cytosol 51.39 54.41
Solyc09g015380.1.1 Tomato plastid 50.46 54.23
VIT_08s0058g00470.t01 Wine grape plastid 56.94 54.19
PGSC0003DMT400061535 Potato plastid 54.63 54.13
Bra005115.1-P Field mustard plastid 37.04 53.69
CDY72318 Canola cytosol 49.54 52.71
Bra005853.1-P Field mustard cytosol 49.54 52.71
PGSC0003DMT400075056 Potato plastid 51.85 52.34
CDX80959 Canola cytosol 49.07 52.22
AT2G40330.1 Thale cress cytosol 51.39 51.63
OQU87775 Sorghum endoplasmic reticulum, extracellular 64.81 51.47
PGSC0003DMT400069734 Potato mitochondrion, plastid 49.54 51.44
CDY24911 Canola cytosol, mitochondrion 50.0 50.7
CDY18867 Canola cytosol, mitochondrion, nucleus, plastid 49.54 50.47
CDY07608 Canola cytosol, mitochondrion 49.54 50.47
CDX74796 Canola cytosol, nucleus, plastid 49.54 50.47
Bra000184.1-P Field mustard cytosol, mitochondrion 49.54 50.47
Bra004967.1-P Field mustard mitochondrion 49.07 50.0
EER88529 Sorghum cytosol 46.76 49.51
EES06532 Sorghum cytosol 45.83 48.53
OQU92088 Sorghum cytosol 45.37 46.23
KRH31193 Soybean cytosol, golgi, plastid 54.17 45.53
Solyc06g050500.2.1 Tomato plastid 56.48 44.36
EES17886 Sorghum cytosol 39.81 43.65
EES04864 Sorghum cytosol 42.13 43.13
Protein Annotations
EnsemblPlants:EES19683EnsemblPlantsGene:SORBI_3009G170700EntrezGene:8061804Gene3D:3.30.530.20InterPro:IPR023393InterPro:Polyketide_cyclase/dehydratase
InterPro:START-like_dom_sfPANTHER:PTHR31213PANTHER:PTHR31213:SF21PFAM:PF10604ProteinID:EES19683ProteinID:EES19683.1
RefSeq:XP_002441253.1SEG:segSUPFAM:SSF55961UniParc:UPI0001A88E81UniProt:C5YZP9MapMan:11.1.2.1.1.1
Description
hypothetical protein
Coordinates
chr9:-:52641822..52643877
Molecular Weight (calculated)
22494.7 Da
IEP (calculated)
8.768
GRAVY (calculated)
0.004
Length
216 amino acids
Sequence
(BLAST)
001: MPYTAPRPSP QQHSRVTGGG AKAAIVAASH GASCAAVPAE VARHHEHAAR AGQCCSAVVQ AIAAPVGAVW SVVRRFDRPQ AYKHFIRSCR LVDDGGGGAG
101: AGAGATVAVG SVREVRVVSG LPATSSRERL EILDDERRVL SFRVVGGEHR LANYRSVTTV HEAEAGAGGT VVVESYVVDV PPGNTADETR VFVDTIVRCN
201: LQSLARTAER LALALA
Best Arabidopsis Sequence Match ( AT5G05440.1 )
(BLAST)
001: MRSPVQLQHG SDATNGFHTL QPHDQTDGPI KRVCLTRGMH VPEHVAMHHT HDVGPDQCCS SVVQMIHAPP ESVWALVRRF DNPKVYKNFI RQCRIVQGDG
101: LHVGDLREVM VVSGLPAVSS TERLEILDEE RHVISFSVVG GDHRLKNYRS VTTLHASDDE GTVVVESYIV DVPPGNTEEE TLSFVDTIVR CNLQSLARST
201: NRQ
Arabidopsis Description
PYL5Abscisic acid receptor PYL5 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLB1]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.