CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

nucleus 1
peroxisome 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER88529
EER92405
EER93155
EES03354
EES04686
EES06532
EES19575
EES19683
KXG22060
KXG22062
KXG22064
OQU87775
OQU88438
OQU92088

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G07430.1	OQU88438	AT1G30270.1	17898163
AT1G07430.1	EES03354	AT2G26650.1	17898163
AT1G07430.1	EER93155	AT3G06610.1	21798944
AT3G11410.1	EER88529	AT1G73000.1	19407142
AT3G11410.1	EES06532	AT1G73000.1	19407142
AT3G11410.1	EER88529	AT2G26040.1	19407142
AT3G11410.1	EES06532	AT2G26040.1	19407142
AT3G11410.1	EES04686	AT2G33610.1	19033529
AT3G11410.1	EER92405	AT2G38310.1	19407142
AT3G11410.1	EES19683	AT2G38310.1	19407142
AT3G11410.1	OQU87775	AT2G38310.1	19407142
AT3G11410.1	OQU92088	AT4G17870.1	19407142
AT3G11410.1	EES19575	AT4G22200.1	11181729
AT3G11410.1	KXG22060	AT4G22200.1	11181729
AT3G11410.1	KXG22062	AT4G22200.1	11181729
AT3G11410.1	KXG22064	AT4G22200.1	11181729
AT3G11410.1	EES19575	AT4G22200.1	12034902
AT3G11410.1	KXG22060	AT4G22200.1	12034902
AT3G11410.1	KXG22062	AT4G22200.1	12034902
AT3G11410.1	KXG22064	AT4G22200.1	12034902
AT3G11410.1	OQU92088	AT5G46790.1	19407142
AT5G59220.1	EER92405	AT2G38310.1	19407142
AT5G59220.1	EES19683	AT2G38310.1	19407142
AT5G59220.1	OQU87775	AT2G38310.1	19407142
AT5G59220.1	OQU92088	AT4G17870.1	19407142

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER96576	Sorghum	cytosol	89.66	50.98
Zm00001d005609_P001	Maize	cytosol, mitochondrion, nucleus, plastid	81.28	47.14
Zm00001d020100_P001	Maize	mitochondrion, nucleus, peroxisome, plastid	80.79	45.81
GSMUA_AchrUn_...	Banana	cytosol	62.07	44.52
TraesCS5A01G183600.1	Wheat	peroxisome	73.89	42.98
TraesCS5B01G182000.1	Wheat	peroxisome	73.4	42.69
Os09t0325700-01	Rice	cytosol	74.88	42.46
TraesCS5D01G188600.1	Wheat	peroxisome	72.91	42.41
KRH73525	Soybean	cytosol, mitochondrion, peroxisome, plastid	19.7	37.74
GSMUA_Achr6P15180_001	Banana	cytosol	62.07	34.05
AT2G29380.1	Thale cress	nucleus	60.59	33.98
CDY18067	Canola	cytosol	9.85	33.9
Bra018398.1-P	Field mustard	cytosol	58.13	32.24
CDY45436	Canola	cytosol	57.64	31.97
CDY40181	Canola	cytosol	57.64	31.97
CDY67257	Canola	nucleus	57.64	31.54
CDY67227	Canola	cytosol	57.64	31.54
Bra002038.1-P	Field mustard	nucleus	58.13	31.05
VIT_06s0004g05460.t01	Wine grape	nucleus	60.1	31.04
EER92493	Sorghum	nucleus	61.08	30.92
CDY06705	Canola	nucleus	59.11	30.77
EES01744	Sorghum	plastid	62.07	30.58
VIT_13s0019g02200.t01	Wine grape	plastid	60.1	30.5
Bra002594.1-P	Field mustard	plastid	59.61	29.37
AT5G59220.1	Thale cress	nucleus	59.61	29.3
CDY01017	Canola	nucleus	56.65	29.26
CDY08530	Canola	nucleus	56.65	29.26
OQU78453	Sorghum	nucleus	56.65	29.11
AT3G11410.1	Thale cress	cytosol	57.14	29.07
Bra034845.1-P	Field mustard	nucleus	57.14	29.07
Solyc05g052980.2.1	Tomato	nucleus	58.13	28.85
KRG97855	Soybean	cytosol	56.65	28.75
KRH31027	Soybean	cytosol	56.65	28.68
Solyc03g096670.2.1	Tomato	nucleus	57.14	28.57
KRH15068	Soybean	cytosol	56.16	28.5
PGSC0003DMT400077989	Potato	cytosol	57.14	28.29
PGSC0003DMT400043146	Potato	nucleus	57.14	28.29
PGSC0003DMT400069947	Potato	cytosol	58.13	28.23
Bra015579.1-P	Field mustard	nucleus	59.11	28.17
CDY10275	Canola	nucleus	59.61	28.14
KRH73067	Soybean	cytosol	56.16	28.01
CDY33008	Canola	nucleus, plastid	54.19	27.85
Solyc06g076400.2.1	Tomato	nucleus	56.16	27.8
Bra030455.1-P	Field mustard	cytosol	21.67	27.67
AT1G07430.1	Thale cress	nucleus	59.61	27.38
CDX80307	Canola	nucleus, plastid	53.2	27.27
Bra031574.1-P	Field mustard	nucleus	56.65	26.38
CDY06259	Canola	nucleus	56.65	26.38
KXG22152	Sorghum	nucleus	57.64	25.22
OQU87413	Sorghum	cytosol	46.8	24.8
KXG22422	Sorghum	cytosol, nucleus, plastid	46.31	24.74
KXG22681	Sorghum	cytosol	46.31	21.96
KXG33023	Sorghum	nucleus	50.25	21.52
EES11811	Sorghum	plastid	51.72	21.47
EES00964	Sorghum	peroxisome, plasma membrane, vacuole	46.31	19.5
OQU90183	Sorghum	mitochondrion	26.6	19.01
CDY36606	Canola	nucleus	21.18	17.2
OQU86100	Sorghum	nucleus	19.21	9.77
KXG28797	Sorghum	golgi, plasma membrane, vacuole	27.59	5.25
PGSC0003DMT400049695	Potato	extracellular	0.0	0.0

Protein Annotations

KEGG:04658+3.1.3.16	KEGG:04660+3.1.3.16	Gene3D:3.60.40.10	MapMan:35.1	UniProt:A0A1B6QDJ1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004722	GO:GO:0006464	GO:GO:0006470	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	InterPro:IPR001932	InterPro:IPR036457	EnsemblPlants:KXG35986
ProteinID:KXG35986	ProteinID:KXG35986.1	PFAM:PF00481	InterPro:PP2C	InterPro:PPM-type_dom_sf	InterPro:PPM-type_phosphatase_dom
PFscan:PS51746	PANTHER:PTHR13832	PANTHER:PTHR13832:SF518	SMART:SM00332	EnsemblPlantsGene:SORBI_3002G260300	SUPFAM:SSF81606
UniParc:UPI00081AE5AF	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:-:64553950..64554573

Molecular Weight (calculated)

21331.4 Da

IEP (calculated)

5.113

GRAVY (calculated)

0.034

Length

203 amino acids

Sequence
(BLAST)

001: MHELLGEELV VAADDMSWTA AMERSFARMD SEVMSVGGRA AASGACRCDA HKCDHVGSTA MVAVVEERRV VVANCGDSRA VLCCGGDGAP SVPLSSDHKP
101: DRPDELARIE AAGEREGARV LGVSYVSSVP EVTVTNRSNG DECLILASDG PWDVVSNKAA CEVARACLRR GRAKWCAEAA ALLTKLALAR RSSDNVSVIV
201: VVC

Best Arabidopsis Sequence Match ( AT1G07430.1 )
(BLAST)

001: MADICYEDET SACESRPLWS SRKWRIGVQR FRMSPSEMNP TASTTEEEDK SEGIYNKRNK QEEYDFMNCA SSSPSQSSPE EESVSLEDSD VSISDGNSSV
101: NDVAVIPSKK TVKETDLRPR YGVASVCGRR RDMEDAVALH PSFVRKQTEF SRTRWHYFGV YDGHGCSHVA ARCKERLHEL VQEEALSDKK EEWKKMMERS
201: FTRMDKEVVR WGETVMSANC RCELQTPDCD AVGSTAVVSV ITPEKIIVAN CGDSRAVLCR NGKAVPLSTD HKPDRPDELD RIQEAGGRVI YWDGARVLGV
301: LAMSRAIGDN YLKPYVTSEP EVTVTDRTEE DEFLILATDG LWDVVTNEAA CTMVRMCLNR KSGRGRRRGE TQTPGRRSEE EGKEEEEKVV GSRKNGKRGE
401: ITDKACTEAS VLLTKLALAK HSSDNVSVVV IDLRRRRKRH VA

Arabidopsis Description

AIP1Protein phosphatase 2C 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNW3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.