Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 2
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY33008 | Canola | nucleus, plastid | 95.96 | 96.2 |
| AT5G59220.1 | Thale cress | nucleus | 84.6 | 81.11 |
| CDY18067 | Canola | cytosol | 9.85 | 66.1 |
| VIT_06s0004g05460.t01 | Wine grape | nucleus | 58.59 | 59.03 |
| CDY40181 | Canola | cytosol | 53.79 | 58.2 |
| CDY45436 | Canola | cytosol | 53.28 | 57.65 |
| GSMUA_AchrUn_... | Banana | cytosol | 39.9 | 55.83 |
| CDY06705 | Canola | nucleus | 53.28 | 54.1 |
| CDY67257 | Canola | nucleus | 50.0 | 53.37 |
| KXG35986 | Sorghum | cytosol, peroxisome, plastid | 27.27 | 53.2 |
| CDY67227 | Canola | cytosol | 49.75 | 53.1 |
| Solyc06g076400.2.1 | Tomato | nucleus | 54.55 | 52.68 |
| GSMUA_Achr6P15180_001 | Banana | cytosol | 48.74 | 52.16 |
| CDY10275 | Canola | nucleus | 55.56 | 51.16 |
| Zm00001d005609_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 44.44 | 50.29 |
| CDY08530 | Canola | nucleus | 49.75 | 50.13 |
| CDY01017 | Canola | nucleus | 49.49 | 49.87 |
| EER96576 | Sorghum | cytosol | 44.95 | 49.86 |
| GSMUA_Achr11P... | Banana | cytosol | 49.49 | 49.62 |
| CDY06259 | Canola | nucleus | 54.29 | 49.31 |
| TraesCS5A01G183600.1 | Wheat | peroxisome | 43.18 | 49.0 |
| TraesCS5D01G188600.1 | Wheat | peroxisome | 42.68 | 48.42 |
| TraesCS4B01G210100.1 | Wheat | nucleus | 49.49 | 48.28 |
| Os03t0268600-01 | Rice | nucleus | 49.24 | 48.27 |
| GSMUA_Achr5P29000_001 | Banana | cytosol | 46.46 | 48.17 |
| TraesCS5B01G182000.1 | Wheat | peroxisome | 42.42 | 48.14 |
| Os09t0325700-01 | Rice | cytosol | 43.43 | 48.04 |
| HORVU4Hr1G060370.1 | Barley | nucleus | 48.48 | 48.0 |
| Zm00001d020100_P001 | Maize | mitochondrion, nucleus, peroxisome, plastid | 42.68 | 47.21 |
| TraesCS4D01G210900.1 | Wheat | nucleus | 48.48 | 46.83 |
| Zm00001d028574_P001 | Maize | nucleus | 46.72 | 46.72 |
| EER92493 | Sorghum | nucleus | 47.22 | 46.63 |
| TraesCS4A01G094300.1 | Wheat | nucleus | 47.73 | 46.21 |
| TraesCS3D01G355900.1 | Wheat | plastid | 46.21 | 46.1 |
| HORVU3Hr1G085930.3 | Barley | nucleus, plastid | 45.71 | 46.06 |
| TraesCS3A01G362200.1 | Wheat | nucleus, plastid | 45.45 | 46.04 |
| EES01744 | Sorghum | plastid | 46.72 | 44.9 |
| Zm00001d042886_P001 | Maize | nucleus | 46.21 | 44.85 |
| Zm00001d012401_P001 | Maize | cytosol, mitochondrion, nucleus, plastid | 46.72 | 44.79 |
| Os01t0846300-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 45.96 | 43.96 |
| TraesCS3B01G394600.3 | Wheat | plastid | 46.21 | 42.76 |
| KXG22152 | Sorghum | nucleus | 46.46 | 39.66 |
| CDY50002 | Canola | cytosol | 16.92 | 39.18 |
| CDY32620 | Canola | cytosol | 37.63 | 38.11 |
| CDY38877 | Canola | cytosol | 37.88 | 36.95 |
| CDY36606 | Canola | nucleus | 22.73 | 36.0 |
| CDY50003 | Canola | nucleus | 37.12 | 35.85 |
| CDX92752 | Canola | cytosol | 36.11 | 34.88 |
| CDY42756 | Canola | cytosol | 36.36 | 34.87 |
| CDX96761 | Canola | cytosol | 30.81 | 34.86 |
| CDX83901 | Canola | cytosol | 30.56 | 34.57 |
| CDX94382 | Canola | cytosol | 36.62 | 34.52 |
| CDX89368 | Canola | cytosol | 36.87 | 34.27 |
| CDY14318 | Canola | nucleus | 36.11 | 33.89 |
| CDY38260 | Canola | cytosol | 34.85 | 32.7 |
| CDY54381 | Canola | cytosol, mitochondrion, plastid | 34.85 | 32.62 |
| CDX72943 | Canola | cytosol, peroxisome, plastid | 35.1 | 29.26 |
| CDX96432 | Canola | cytosol, peroxisome, plastid | 35.35 | 28.93 |
| CDY48313 | Canola | cytosol | 34.85 | 27.54 |
| CDY26234 | Canola | cytosol | 34.34 | 27.42 |
| PGSC0003DMT400049695 | Potato | extracellular | 2.53 | 9.09 |
| CDY53715 | Canola | plasma membrane, vacuole | 19.7 | 7.54 |
| CDX93912 | Canola | plasma membrane, vacuole | 19.7 | 7.53 |
Protein Annotations
| KEGG:04658+3.1.3.16 | KEGG:04660+3.1.3.16 | MapMan:18.4.24.2.1 | Gene3D:3.60.40.10 | GO:A0A078CU57 | EnsemblPlants:CDX80307 |
| ProteinID:CDX80307 | ProteinID:CDX80307.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004722 | GO:GO:0006464 |
| GO:GO:0006470 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| EnsemblPlantsGene:GSBRNA2T00133315001 | InterPro:IPR001932 | InterPro:IPR036457 | PFAM:PF00481 | InterPro:PP2C | InterPro:PPM-type_dom_sf |
| InterPro:PPM-type_phosphatase_dom | PFscan:PS51746 | PANTHER:PTHR13832 | PANTHER:PTHR13832:SF518 | SMART:SM00332 | SUPFAM:SSF81606 |
| UniParc:UPI0004EE4004 | SEG:seg | : | : | : | : |
Description
BnaC09g34350D
Coordinates
chrLK031820:-:1430584..1434124
Molecular Weight (calculated)
43698.8 Da
IEP (calculated)
6.272
GRAVY (calculated)
-0.347
Length
396 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEICYDNES VMTKTTSTVV KKTVATTTTK RRERSSSQAA RRRRMEIRRY KFVSGEQDAA VFVDGELQRR GRRESTVTYE IAKTETAKEV VVLCESLSST
101: VMALPDPDAY PKYGVASVCG RRREMEDAVA VHPFFFRQQT EFSSIGYHYC GVYDGHGCSH VAMRCRERLH ELVQEELEAD DADWEKSMSR SFTRMDLEAV
201: ALNAGGTANC RCELQRPECD AVGSTAVVSI LTPEKIVVAN CGDSRAVLCR NGKAIPLSSD HKPDRPDELD RIQAAGGRVI YWDGPRVLGV LAMSRAIGDN
301: YLKPYVISKP EVTVTDRVKQ DEFLILASDG LWDVVSNETA CNVVRMCLKG KVNSQLTSSP ENDVTGAGNV VVVGGDVSNK ASDNVSVVVV DLRRDT
101: VMALPDPDAY PKYGVASVCG RRREMEDAVA VHPFFFRQQT EFSSIGYHYC GVYDGHGCSH VAMRCRERLH ELVQEELEAD DADWEKSMSR SFTRMDLEAV
201: ALNAGGTANC RCELQRPECD AVGSTAVVSI LTPEKIVVAN CGDSRAVLCR NGKAIPLSSD HKPDRPDELD RIQAAGGRVI YWDGPRVLGV LAMSRAIGDN
301: YLKPYVISKP EVTVTDRVKQ DEFLILASDG LWDVVSNETA CNVVRMCLKG KVNSQLTSSP ENDVTGAGNV VVVGGDVSNK ASDNVSVVVV DLRRDT
001: MAEICYENET MMIETTATVV KKATTTTRRR ERSSSQAARR RRMEIRRFKF VSGEQEPVFV DGDLQRRRRR ESTVAASTST VFYETAKEVV VLCESLSSTV
101: VALPDPEAYP KYGVASVCGR RREMEDAVAV HPFFSRHQTE YSSTGFHYCG VYDGHGCSHV AMKCRERLHE LVREEFEADA DWEKSMARSF TRMDMEVVAL
201: NADGAAKCRC ELQRPDCDAV GSTAVVSVLT PEKIIVANCG DSRAVLCRNG KAIALSSDHK PDRPDELDRI QAAGGRVIYW DGPRVLGVLA MSRAIGDNYL
301: KPYVISRPEV TVTDRANGDD FLILASDGLW DVVSNETACS VVRMCLRGKV NGQVSSSPER EMTGVGAGNV VVGGGDLPDK ACEEASLLLT RLALARQSSD
401: NVSVVVVDLR RDT
101: VALPDPEAYP KYGVASVCGR RREMEDAVAV HPFFSRHQTE YSSTGFHYCG VYDGHGCSHV AMKCRERLHE LVREEFEADA DWEKSMARSF TRMDMEVVAL
201: NADGAAKCRC ELQRPDCDAV GSTAVVSVLT PEKIIVANCG DSRAVLCRNG KAIALSSDHK PDRPDELDRI QAAGGRVIYW DGPRVLGVLA MSRAIGDNYL
301: KPYVISRPEV TVTDRANGDD FLILASDGLW DVVSNETACS VVRMCLRGKV NGQVSSSPER EMTGVGAGNV VVGGGDLPDK ACEEASLLLT RLALARQSSD
401: NVSVVVVDLR RDT
Arabidopsis Description
SAG113Probable protein phosphatase 2C 78 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIF5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.