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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX83901 Canola cytosol 92.57 92.57
Bra016595.1-P Field mustard cytosol 99.14 84.63
CDY48313 Canola cytosol 89.43 62.48
CDY26234 Canola cytosol 87.71 61.9
CDY50002 Canola cytosol 29.14 59.65
HORVU3Hr1G067360.1 Barley cytosol, peroxisome 8.29 56.86
CDX72943 Canola cytosol, peroxisome, plastid 77.14 56.84
CDX96432 Canola cytosol, peroxisome, plastid 76.86 55.58
GSMUA_Achr7P24000_001 Banana cytosol 56.29 50.26
Zm00001d011132_P001 Maize cytosol, nucleus 20.57 48.32
HORVU7Hr1G029040.1 Barley cytosol, peroxisome 39.43 47.1
Os01t0583100-01 Rice cytosol 52.86 46.72
HORVU3Hr1G067380.4 Barley cytosol 44.57 46.29
Zm00001d038846_P001 Maize cytosol, nucleus 48.57 45.95
CDY18067 Canola cytosol 7.71 45.76
KXG22422 Sorghum cytosol, nucleus, plastid 48.57 44.74
TraesCS1A01G358600.1 Wheat cytosol 47.43 43.68
CDY42756 Canola cytosol 51.43 43.58
TraesCS1B01G375100.1 Wheat cytosol 47.43 43.57
Zm00001d009747_P001 Maize cytosol 52.57 43.5
CDX92752 Canola cytosol 50.86 43.41
CDY50003 Canola nucleus 50.86 43.41
TraesCS3D01G249000.1 Wheat cytosol 46.86 43.27
HORVU1Hr1G080290.6 Barley cytosol 47.43 43.23
TraesCS1D01G363500.1 Wheat cytosol 47.14 43.19
TraesCS1D01G449700.1 Wheat cytosol 50.29 42.93
GSMUA_Achr8P05700_001 Banana cytosol, peroxisome, plasma membrane 53.43 42.89
KXG22681 Sorghum cytosol 52.29 42.76
TraesCS1A01G441200.1 Wheat cytosol 50.29 42.72
CDY54381 Canola cytosol, mitochondrion, plastid 51.43 42.55
TraesCS3A01G249000.1 Wheat cytosol 46.86 42.49
CDY14318 Canola nucleus 51.14 42.42
CDY38260 Canola cytosol 51.14 42.42
HORVU1Hr1G094840.9 Barley extracellular, mitochondrion 50.57 42.34
Zm00001d011202_P002 Maize cytosol, peroxisome, plastid 52.86 42.24
CDX94382 Canola cytosol 50.57 42.14
Zm00001d039163_P002 Maize cytosol 51.43 41.96
PGSC0003DMT400006608 Potato plastid 64.86 41.65
VIT_09s0002g01850.t01 Wine grape cytosol, peroxisome, plastid 65.14 41.61
CDX89368 Canola cytosol 50.57 41.55
OQU87413 Sorghum cytosol 45.43 41.51
HORVU3Hr1G050340.1 Barley plasma membrane, vacuole 55.71 40.88
EES00964 Sorghum peroxisome, plasma membrane, vacuole 56.29 40.87
TraesCS3B01G240000.1 Wheat peroxisome, plasma membrane, vacuole 55.71 40.71
TraesCS3D01G212100.1 Wheat peroxisome, plasma membrane, vacuole 55.14 40.55
Zm00001d044301_P001 Maize cytosol, nucleus 56.0 40.5
TraesCS3A01G209200.1 Wheat peroxisome, plasma membrane, vacuole 55.14 40.29
Os05t0592800-02 Rice endoplasmic reticulum, vacuole 51.14 40.22
TraesCS3B01G277900.1 Wheat cytosol 47.43 39.81
TraesCS1B01G475700.1 Wheat cytosol 50.0 39.33
GSMUA_Achr3P26270_001 Banana cytosol, peroxisome, plastid 53.43 37.7
CDY67227 Canola cytosol 39.43 37.2
CDY67257 Canola nucleus 39.14 36.93
Zm00001d011131_P001 Maize cytosol 29.43 36.52
Os05t0537400-00 Rice cytosol 30.57 36.15
CDY45436 Canola cytosol 36.29 34.7
CDY40181 Canola cytosol 36.29 34.7
CDY01017 Canola nucleus 38.86 34.61
CDY08530 Canola nucleus 38.57 34.35
CDY06705 Canola nucleus 36.0 32.31
CDY38877 Canola cytosol 36.0 31.03
CDX80307 Canola nucleus, plastid 34.86 30.81
CDY33008 Canola nucleus, plastid 34.57 30.63
CDY10275 Canola nucleus 37.14 30.23
Solyc08g062650.2.1 Tomato extracellular 40.29 30.06
CDY32620 Canola cytosol 33.43 29.92
CDY06259 Canola nucleus 36.29 29.13
TraesCS7A01G047900.1 Wheat cytosol, mitochondrion, peroxisome 8.57 27.03
CDY36606 Canola nucleus 16.57 23.2
CDY53715 Canola plasma membrane, vacuole 25.14 8.5
CDX93912 Canola plasma membrane, vacuole 25.14 8.49
Protein Annotations
KEGG:04658+3.1.3.16KEGG:04660+3.1.3.16MapMan:11.1.2.1.1.2MapMan:18.4.24.2.1Gene3D:3.60.40.10GO:A0A078E693
EnsemblPlants:CDX96761ProteinID:CDX96761ProteinID:CDX96761.1GO:GO:0003674GO:GO:0003824GO:GO:0004722
GO:GO:0005488GO:GO:0006464GO:GO:0006470GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016787GO:GO:0019538GO:GO:0043169EnsemblPlantsGene:GSBRNA2T00102986001InterPro:IPR001932InterPro:IPR036457
PFAM:PF00481InterPro:PP2CInterPro:PP2C_BSInterPro:PPM-type_dom_sfInterPro:PPM-type_phosphatase_domScanProsite:PS01032
PFscan:PS51746PANTHER:PTHR13832PANTHER:PTHR13832:SF516SMART:SM00332SUPFAM:SSF81606UniParc:UPI0004EDE0F4
Description
BnaA08g23040D
Coordinates
chrLK031895:-:878100..880146
Molecular Weight (calculated)
38404.9 Da
IEP (calculated)
4.811
GRAVY (calculated)
-0.172
Length
350 amino acids
Sequence
(BLAST)
001: MEEISPAVAL TLSLANTMCD SGISSALDIT ELENVTDAVN MLCDQNGEVE YTMEEDVSAS EVVISLPEET HHHNVARGGS RSVYELDCIP LWGTVSIRGE
101: RSEMEDAVRA LPRFLKIPIK MLMGGDQEGM SPTLTHLTSH FFGVYDGHGG LQINRPVAVS PETVGSTAVV ALVCSSHIIV SNCGDSRAVL LRGKEAMPLS
201: VDHKPDREDE YARIERAGGK VIQWQGARVS GVLAMSRSIG DQYLEPYVIP EPEVTFMPRA REDECLILAS DGLWDVMSNQ DACEFARRRI LWWHKRNGAL
301: PLAERGVGED QACQAAADYL SKLALQKGSR DNISVIVVDL KAQRKLKIRS
Best Arabidopsis Sequence Match ( AT1G72770.3 )
(BLAST)
001: MEEMTPAVAM TLSLAANTMC ESSPVEITQL KNVTDAADLL SDSENQSFCN GGTECTMEDV SELEEVGEQD LLKTLSDTRS GSSNVFDEDD VLSVVEDNSA
101: VISEGLLVVD AGSELSLSNT AMEIDNGRVL ATAIIVGESS IEQVPTAEVL IAGVNQDTNT SEVVIRLPDE NSNHLVKGRS VYELDCIPLW GTVSIQGNRS
201: EMEDAFAVSP HFLKLPIKML MGDHEGMSPS LTHLTGHFFG VYDGHGGHKV ADYCRDRLHF ALAEEIERIK DELCKRNTGE GRQVQWDKVF TSCFLTVDGE
301: IEGKIGRAVV GSSDKVLEAV ASETVGSTAV VALVCSSHIV VSNCGDSRAV LFRGKEAMPL SVDHKPDRED EYARIENAGG KVIQWQGARV FGVLAMSRSI
401: GDRYLKPYVI PEPEVTFMPR SREDECLILA SDGLWDVMNN QEVCEIARRR ILMWHKKNGA PPLAERGKGI DPACQAAADY LSMLALQKGS KDNISIIVID
501: LKAQRKFKTR T
Arabidopsis Description
HAB1Protein phosphatase 2C 16 [Source:UniProtKB/Swiss-Prot;Acc:Q9CAJ0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.